| Protein: | gi|24650471, gi|... |
| Organism: | Drosophila melanogaster |
| Length: | 1003 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24650471, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
405.0 | [0..2] | [998..154] |
|
Region A: Residues: [1-211] |
1 11 21 31 41 51
| | | | | |
1 DGCITKVRPP SKEKLFKRSS RIFPNLVFCI SAWICLMRPS FGSIIKDSVK CTEGSVAADI 60
61 DDCASYFQCI DDETVHLNCA NGSYFEASNE ICVVDEFGVC PTSRRLCFDG DIFEDINDCM 120
121 SYVKCIRGDL VRQRCPAGSN FNVISKNCQM SRTGSCASPK EICLEGELQV DSEDCAGYLE 180
181 CLNGGLVKEK CPIGSYFEPI FKLCQLDENG V
|
| Detection Method: |  |
| Confidence: | 4.154902 |
| Match: | 2wgcA |
| Description: | Wheat germ agglutinin (WGA) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.098272402754001 | bayes_pls_golite062009 |
|
Region A: Residues: [212-411] |
1 11 21 31 41 51
| | | | | |
1 CSSSSSECTD GEVRVDPNNC AGYFNCENGR LITKTCPSGT YFEPTYKTCT VDLKGVCVEP 60
61 PAKCTEGQLK IDPNNCAGYL KCIDGEFVEE KCPGGTYYDF KLETCLVDTE GVCVTIRKLC 120
121 IEGLREKDPK DCAAYTQCIR GRVESVMCDS GRYFNVTQGE CLADLYEVCL KSRKEHFRIV 180
181 EHHQYDESTT PNSYQQTEST
|
| Detection Method: | |
| Confidence: | 4.39794 |
| Match: | 1jv2B |
| Description: | Hybrid domain of integrin beta; Integrin beta A domain; Integrin beta tail domain; Integrin beta EGF-like domains |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [412-793] |
1 11 21 31 41 51
| | | | | |
1 DADFQSTDSA LQEVTSQNSC IFDLNGACVG QSTICTEGKK QRDINNCAGY LKCIDGEFVE 60
61 EECPESTYYD SNLETCLVDN YGACVTSTSI CVEGIVEEDP KDCAGYNQCV RGKVEPLKCA 120
121 FGRYFNGTQG ECLIDLDEVC AKSSQVDYDR DLEQFQYSQS TSEYLLEYTN TDTTIADFST 180
181 ESSNADFNRY TDSNSYTDTE STTNDVPTST EVSTFDLKTT DLSLQFTTLD GVDNLDINTG 240
241 TCVYNNTLFI EGIREVNPQD CAGYIECFGG VAKELKCDSG RYFNETQRNC SVDVDEICLK 300
301 SDKTIVLDLQ TTTESTPNFT TSVDPFAKCR DGQLRLDPKN CAGFLKCVDG ELKEEMCPSG 360
361 FFYNSTSSKC MVDIRATCVT NI
|
| Detection Method: | |
| Confidence: | 10.0 |
| Match: | 1n7dA |
| Description: | Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.286076792172079 | bayes_pls_golite062009 |
| protein binding | 0.14494900666454 | bayes_pls_golite062009 |
|
Region A: Residues: [794-919] |
1 11 21 31 41 51
| | | | | |
1 KYCIEGVREE DPNNCAGYRQ CIRGLVQNLN CPLGQYFNVA ERDCLMDVHK VCARTEEVYK 60
61 SDEVQHNDTG PPMTKPDESC IRDINGVCVD PLAKCREGQH KLDPNNCAGY LKCQNGELIE 120
121 ELCPNG
|
| Detection Method: | |
| Confidence: | 3.522879 |
| Match: | 1wgcA |
| Description: | Wheat germ agglutinin (WGA) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [920-1003] |
1 11 21 31 41 51
| | | | | |
1 FYYDFLMKIC LVDRRGICVT NIQICDEGAL EEDPHDCAGY RQCIDGQVEN LKCPFGTYFN 60
61 VPLRDCLIDV DEICVRPEYK YFEY
|
| Detection Method: | |
| Confidence: | 2.8 |
| Match: | 1dqcA |
| Description: | Tachycitin |
Matching Structure (courtesy of the PDB): |
|
