YRC Public Data Repository - Protein Structure Prediction

Protein:	FBpp0307705, T48-PA
Organism:	Drosophila melanogaster
Length:	419 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0307705, T48-PA.

Description	E-value	Query Range	Subject Range
gi\|542575, gi\|459594 - pir\|\|S42989 T48 protein - fruit fly (Drosophila melanogaster), gi\|459594\|emb\|CAA55003.1\| T48 [Droso...	772.0	[0..1]	[419..1]

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Predicted Domain #1

Region A:
Residues: [1-300]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSVEVAQSG PSAIFWLVQV LIVGAAQAAT PFAKEYRNAG LYNGNTLVDL DGSTTLDMGQ  60
   61 EKPTSSSSGL SGGFKSESSV VLPGMLQNSG CPLTTSSHCL RCNKVGCIKC PMYLVTDTRQ 120
  121 CVDQCPAGYL DQWSAHTEFM GRVCVPTGYS GPLMAALAGL LGGFLVCLSL LAVAVMLVKR 180
  181 KRRRKSIKQK LINENTMDRA DFMRQLNEMR PNAEYFLAML NDTRRQIRKL YLSGEVAAAN 240
  241 SYRPIVRDLA KLLILLNRPI ELIPAPPPDW SRLYAWSEQA LERYKPQVGQ LIDFFQASHG 300
  301

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2

Region A:
Residues: [301-419]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 HSAGHHEVLY AAPNKKKQLQ QPSIFRQQVT PTATPQGVGE LMAGDRSSSA SAQQKLHLFG  60
   61 SLISLHEFEE PRASDPFGSS FNTLKSGNLI SDLNASSLWL EDEFYKLGFR PQDEITTEL