YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: CG6403-PA, FBpp0...
Organism: Drosophila melanogaster
Length: 153 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6403-PA, FBpp0....

Description E-value Query
Range
Subject
Range
gi|17945346 - gi|17945346|gb|AAL48729.1| RE16426p [Drosophila melanogaster]
241.0 [0..1] [132..1]
gi|54637702, gi|... - gi|54637702|gb|EAL27104.1| GA19565-PA [Drosophila pseudoobscura], gi|125773419|ref|XP_001357968.1| G...
173.0 [0..4] [150..1]
gi|57336968 - gi|57336968|emb|CAH61127.1| hypothetical protein [Drosophila subobscura]
118.0 [0..52] [152..1]

Back

Predicted Domain #1
Region A:
Residues: [1-92]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKALIIFFG ILALGYAASV GTASDASEVC QSQDELWGGE DIRKFYFCLD GKVIADECDS  60
   61 GYYFVNNATI SGCLPSDLMK PSCVNLDTKV PD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [93-153]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 CTGTSKLQPQ AADDVASFYL CTSEGATLLS CPDGKAFVSQ DGYLGCFAWS EWRSLRNCVD  60
   61 D

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.01
Match: 1dqcA
Description: Tachycitin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle