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View Structure Prediction Details

Protein: CG33970-PB
Organism: Drosophila melanogaster
Length: 518 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG33970-PB.

Description E-value Query
Range
Subject
Range
FBpp0311936, CG3... - This gene is referred to in FlyBase by the symbol Dmel\CG33970 (CG33970, FBgn0053970). It is a prote...
gi|220947896 - gi|220947896|gb|ACL86491.1| CG33970-PA [synthetic construct]
326.0 [0..1] [518..260]

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Predicted Domain #1
Region A:
Residues: [1-98]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLAEESPDYL RQQYNADSLE DVFLKLSVLQ NMGKRRRSSI AQEIVEQVTV PAISNPALDM  60
   61 SDEQHAAEIS GEFGDNISMS SAARDPISTT APAAPPLP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [99-160]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PPQEIPTSFW YNLHVMQSHH LHALIWKNFL WMMRNVGVML FIVGLPVVQI LLFCYAIGHD  60
   61 PT

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [161-256]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GLKLAVANHE MSGEMIMEQF CPVHTGCNQT MLSCRYLDML VKNKSMVVQY VTDDEMAYEE  60
   61 VRKGRAWAAL VIQPNYTASL MERVEDGRYA EDGTIE

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [257-518]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SSDLAVRMDW SNQQISQLLY RDLQYTFFNF VGDMLSDCDV NPKLGRVPVD FQHPVYGYRN  60
   61 PNFTDFAAPG VILTIIFFLA VAVTSGAMLI DRNEGMLERC LVAGITGPEI LLSQVVTQFT 120
  121 VMLSQTTFVL IVSFYFFELT LVGNIWLVVA LCILNGLCGM SFGFVISCAV DTERTATYVA 180
  181 MGSFLPIVML CGIIWPIEGM FPLLQFFTAF LPLTKPTESM RSILQRGWGI DNPVVYNGFI 240
  241 SISSWVLVFL VLTILLLKFK KG

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle