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View Structure Prediction Details

Protein: CG17370-PA, CG17...
Organism: Drosophila melanogaster
Length: 417 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG17370-PA, CG17....

Description E-value Query
Range
Subject
Range
gi|50756657 - gi|50756657|ref|XP_415261.1| PREDICTED: similar to SPPL3 protein; presenilin-like protein 4; intrame...
399.0 [0..31] [414..201]

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Predicted Domain #1
Region A:
Residues: [1-116]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHGGAGGGL GAQTVGAGQL GGGAAAAGGG EYRELHWTVS SVMDSSRVST CLISMLLIVY  60
   61 GSFRSLNIEQ EAREREQKKR NESMTNLLTG EPVEKEPTDK FATLDTMHAL CLPLGA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [117-309]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SISLLIMFFF FDSMQLLFAV CTAIIATVAL AFLLLPMCQY IIRPCTDGKR FSFGFCGRFT  60
   61 AAELFSFTLS VSIVCIWVLT GHWLLMDAMG MGLCVAFIAF VRLPSLKVST LLLTGLLIYD 120
  121 VFWVFLSSYI FSTNVMVKVA TRPADNPVGI VARKLHLGGI VRDTPKLNLP GKLVFPSLHN 180
  181 TGHFSMLGLG DVV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [310-417]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGLLLCFVL RYDAYKKAQG VTSDPTLSPP RGVGSRLTYF HCSLLGYFLG LLTATVSSEV  60
   61 FKAAQPALLY LVPFTLLPLL LMAYLKGDLR RMWSEPFIAQ QPSKQLEV

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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Created and Maintained by: Michael Riffle