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View Structure Prediction Details

Protein: CG4553-PA
Organism: Drosophila melanogaster
Length: 363 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG4553-PA.

Description E-value Query
Range
Subject
Range
gi|54639596, gi|... - gi|54639596|gb|EAL28998.1| GA18252-PA [Drosophila pseudoobscura], gi|125778138|ref|XP_001359846.1| G...
379.0 [0..1] [356..1]

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Predicted Domain #1
Region A:
Residues: [1-194]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTARMIQRGL HTARSCLLAR APRRANPGLG YQLEQLQEHP EKSSEASEDY ADLESDFMDV  60
   61 QKTHRQYERE QQQHRDRIRQ FMIKHKYFRD AKLPNLLLHA EKEQMRLLHE RDPEEWSVER 120
  121 LAESFPATPD IVQKILRAKW RPRSVQRIRS HDETVIKNWQ LLGTGKGDFS IPPSLLQHLQ 180
  181 KFAERRWQDL RELK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [195-286]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IQDWPTKSQL PTPQGNEFRK LLGSSSKTTE EMPTPQIPSG YEAPPSAAED ETYLLDKIRN  60
   61 KKKMRLQELK ELQLVESAPA VPEEMKRPIE NP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [287-363]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SGTGFLPSFV PKFASSEIVI SAADQRKYEI TQVKTRIVIP RKLHRQGATY RVEDAYYDDD  60
   61 GELLYRVPGM TRASGDK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle