| Protein: | Vps33B-PA |
| Organism: | Drosophila melanogaster |
| Length: | 640 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Vps33B-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
444.0 | [0..9] | [640..12] |
|
Region A: Residues: [1-640] |
1 11 21 31 41 51
| | | | | |
1 MDLTLDKKLQ GFQLVAQEKL CSILCSIPGK KELILEPDLI KPLEHVVTAS WLKLKGIQRI 60
61 YKHDAAQSLP RSADQVHIYM IRSVLGTFQT LLKQLQPVAS EEMPDISMKM YHIVCVPSCY 120
121 SYFQTLLEQA GLYGLVQLHH FNWDFIYFDQ GVLSLELPNL YECLYLQKNT SPLPAVAQSL 180
181 RLLQMICGQP SLILSFGHHS SQLMQMAKTL GKLPAPTNPP DYGGWLVIDR DKDYPASLLT 240
241 PAIYAGLLLE VFEHSSGEIL VDNSKNKIRS QRVELLQGKK SKIGVNSASK PCSIRLNSTS 300
301 DEIYGDNRYK RFAQVSSLIH AQVKALGLEL QKLNDMQLDE MHDYVARKLP KLTELKSKVL 360
361 RHLNASEIVI QMMGNFRKLQ TLEEDILNND SRKRLLSEID ELLTTDGQRF NTLRLLCLLH 420
421 HCVGVAPEEL QIFARNYCNL FGHQELGVFQ QLSQAGLLPP LVVEKKAPTK LLSNLPLPKF 480
481 QQTEFQANAN RLKLLTSSGD GQDGGSSSKS QSSGLQTCPS FVFNGTYIPL VAQLCSILLK 540
541 INSAEELSSK LGMIEGLHLH LDSGKITPKA YASQVKLNGV ADQDMFPLRL RNLFVFIVGG 600
601 ASYAEIAACD FVAKLTGAQI TVASDSLMAG SDLIATAFNR
|
| Detection Method: |  |
| Confidence: | 117.0 |
| Match: | 1epuA |
| Description: | Neuronal Sec1, NSec1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| SNARE binding | 3.42828022195984 | bayes_pls_golite062009 |
| binding | 2.7837022903231 | bayes_pls_golite062009 |
| syntaxin binding | 2.11416428645287 | bayes_pls_golite062009 |
| protein binding | 1.7224010512877 | bayes_pls_golite062009 |
