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View Structure Prediction Details

Protein: CG11851-PA
Organism: Drosophila melanogaster
Length: 623 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG11851-PA.

Description E-value Query
Range
Subject
Range
gi|125778478, gi... - gi|54639747|gb|EAL29149.1| GA11235 [Drosophila pseudoobscura pseudoobscura], gi|125778478|ref|XP_001...
gi|125778478|ref... - GA11235-PA [Drosophila pseudoobscura], GA11235 [Drosophila pseudoobscura pseudoobscura]
410.0 [0..1] [623..1]

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Predicted Domain #1
Region A:
Residues: [1-290]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPPAARARY IANKADNQIL SKKPPKRPGL NGNNKTKEAT PAGKKKDKDA KKRNQPTSGG  60
   61 QEKGLPNPIM PSVQTAFKTF VSARLCSAIW AYIADCDETF NYWEPLHYII NGHGLQTWEY 120
  121 SPQFGLRSYT YLLLQGVPGY FYQKLFNPSP ILIFYMVRCM LGFGCAVMER YMYKSICQEF 180
  181 GIHIGRLWLI FQLFSVGMFV SSTALLPSSF SMYFGCAALA AWWQQNYCFA IFLTAISALL 240
  241 GWPFAALIGI PLVLEMLLRQ RDWKTFVQWT LISGATVAIP MIAIDTSYFG 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [291-357]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KLTFAPLNIV WYNVFTSHGP NIFGTEPLSY YIINGFLNFN IIWLLALQLP IMLVIDYLIV  60
   61 PAKSKST

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [358-542]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LNFPHYISLA PLYLWLLVFF AQPHKEERFL FPIYPLISLC GAITVDVYQR IFFRMKSVVF  60
   61 KIKAGVHYLD HSMFIAILVM VTSTLLGLSR VFALYRNYHA PMDLMLELNQ FKATPQYDPD 120
  121 VIYNVCIGKD WHRYPGSFFF PAKNFRLRFL KSEFRGMLPA YYDEGQNATK VVQPYFNDLN 180
  181 QENEH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [543-623]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYFDYDRCDF LVDFDEGKYT ALEPNYSKRS KDWSVMKSLP FLIPEKSHKV LRAFYVPFLT  60
   61 DNHIQYGDFN LLKRKTKRNG R

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle