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View Structure Prediction Details

Protein: gi|28381460, gi|...
Organism: Drosophila melanogaster
Length: 828 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|28381460, gi|....

Description E-value Query
Range
Subject
Range
Bili-PG, Bili-PF... - The gene Band4.1 inhibitor LRP interactor is referred to in FlyBase by the symbol Dmel\Bili (CG11848...
555.0 [0..1] [828..1]

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Predicted Domain #1
Region A:
Residues: [1-122]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPNHYYCRS AMQQNPSTSI PQHASNKLNY GMNAGQDYVT CSSGQSQSGY SSKDLVPRSG  60
   61 NSKTLGGNGN MGSPYGGSVC SNSGQCSKNT ANAGNYINIM TVPLGTLQYN RKKLSTQDYE 120
  121 SH

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [123-269]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LYYNTTDVKC RDDYYIANNA AAAIPQHQAH QPHQQPHQHQ HPQHQQQHQQ HQQHQQHQQH  60
   61 QQHLHQQQQQ QANFLHIQQS LQHNHQLSHP EPIHQLPQLQ GTVADPPDAF DNCAIFPSAG 120
  121 GSSNGSGRVA ATQTHQNPSG VVTCDQQ

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [270-422]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VPVSLGSVNM PVPPIMYTVH RVVTTAQIQT AAGSTFASSA SVSSVVSTGQ NDGDCLSPAQ  60
   61 VSSAMAASGN ASCLGGLPDM GANMMSNASA LCPLSDLRSP SGVLTNSSYM PQHHKCNNGN 120
  121 DAQSNPAIQK RLMATSSTSN FATAGKAASN LTR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [423-828]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ALQNVIPTCV YLMSRVAVHM EIEGTAQCPS QVMLAAALGC EELGISNKLL AQSVFGLWMT  60
   61 SALLEMQLKA HHCPYIVRVA WPNLLQKFSN SSPSDRKFDE PMIVLKRNVF FSKRDEEKIK 120
  121 DHRILELLYE EARNNVLTGR YIMEPVHSLM LGGIQARIEL GPYNSHTHTI GFFRQNQARF 180
  181 LPPHVAKSST WLWLPISQKN SAEVKLLEQF KRVPQTATTR KLMRKYLEFC WALPFYGAAY 240
  241 FHGQIEQPVR GIMALVNQKD MEVLVAVNER GVFVIDPYEC TLLLGLRYED LSWDYAKPSA 300
  301 SDDPECLTCI FLQFDAVENG IQVSKLMQIF SKQAAMIDAL ISHFTDQIRN KKQEGNTQEP 360
  361 FHDEPNPIQN NGNGVLCNKL SRLTLATFDE EGGRCIGQMG SLSISY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 80.522879
Match: 1e5wA
Description: Moesin
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.0934358341245259 bayes_pls_golite062009
protein binding 0.03789551947602 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle