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View Structure Prediction Details

Protein: vig2-PC, vig2-PD...
Organism: Drosophila melanogaster
Length: 412 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for vig2-PC, vig2-PD....

Description E-value Query
Range
Subject
Range
gi|113461768, gi... - gi|113461768|ref|YP_719837.1| large adhesin [Haemophilus somnus 129PT], gi|112823811|gb|ABI25900.1| ...
372.0 [0..8] [409..1392]

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Predicted Domain #1
Region A:
Residues: [1-412]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNSGNNRYE LLFMDDDDSS GLAQPQIAAV VAAPKKPEPA KAPKAPKSKS EKENKPVVAA  60
   61 RKANAPVAKN ASPVKGGKGP AGGDVGRPKN PTANGANNQG RFNNNQRYGN KESNGEFGNE 120
  121 LPQRQFNNRD NRGPPRVRTG EKFGKREFDR QSGSDRTGVK SIDKREGGGA HNWGSPKQDI 180
  181 EDLKTTGETS PQAEKEDSAN EQSADPAVAA EEDESKQMTL DEWKALRDQR AKPNYNLRKA 240
  241 GEGAADNAEW KKMIVLSKKK ESNSEDELEY DPSLYPQRVG RLQRIVDIQF NFNDGRKVGF 300
  301 RKGPRPGAGP REGGFRNDGP RGEGGYRNDG PRGEGGYRND GPRGEGPRNE GPRGEGYRND 360
  361 GPRGEGFRGP RFNNGPSNGY ENRQDNNRFG EKRRSAQKPL KVDDEAQFPT LC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 48.221849
Match: 1y0fB
Description: No description for 1y0fB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle