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View Structure Prediction Details

Protein: vig2-PB
Organism: Drosophila melanogaster
Length: 443 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for vig2-PB.

Description E-value Query
Range
Subject
Range
gi|113461768, gi... - gi|113461768|ref|YP_719837.1| large adhesin [Haemophilus somnus 129PT], gi|112823811|gb|ABI25900.1| ...
389.0 [0..46] [440..1393]

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Predicted Domain #1
Region A:
Residues: [1-443]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLAEKHIVA LMFPAIDVST FTFVSGVKFY IMDNSGNNRY ELLFMDDDDS SGLAQPQIAA  60
   61 VVAAPKKPEP AKAPKAPKSK SEKENKPVVA ARKANAPVAK NASPVKGGKG PAGGDVGRPK 120
  121 NPTANGANNQ GRFNNNQRYG NKESNGEFGN ELPQRQFNNR DNRGPPRVRT GEKFGKREFD 180
  181 RQSGSDRTGV KSIDKREGGG AHNWGSPKQD IEDLKTTGET SPQAEKEDSA NEQSADPAVA 240
  241 AEEDESKQMT LDEWKALRDQ RAKPNYNLRK AGEGAADNAE WKKMIVLSKK KESNSEDELE 300
  301 YDPSLYPQRV GRLQRIVDIQ FNFNDGRKVG FRKGPRPGAG PREGGFRNDG PRGEGGYRND 360
  361 GPRGEGGYRN DGPRGEGPRN EGPRGEGYRN DGPRGEGFRG PRFNNGPSNG YENRQDNNRF 420
  421 GEKRRSAQKP LKVDDEAQFP TLC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 51.30103
Match: 1y0fB
Description: No description for 1y0fB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle