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View Structure Prediction Details

Protein: OstStt3-PA
Organism: Drosophila melanogaster
Length: 774 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for OstStt3-PA.

Description E-value Query
Range
Subject
Range
gi|28317200 - gi|28317200|gb|AAD27851.2|AF132552_1 GM01838p [Drosophila melanogaster]
605.0 [0..1] [774..24]

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Predicted Domain #1
Region A:
Residues: [1-164]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRTPKMLNS KVAGYSSLIT FAILLIAWLA GFSSRLFAVI RFESIIHEFD PWFNYRATAY  60
   61 MVQNGWYNFL NWFDERAWYP LGRIVGGTVY PGLMITSGGI HWLLHVLNIP VHIRDICVFL 120
  121 APIFSGLTSI STYLLTKELW SAGAGLFAAS FIAIVPGYIS RSVA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [165-291]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GSYDNEGIAI FALQFTYFLW VRSVKTGSVF WSAAAALSYF YMVSAWGGYV FIINLIPLHV  60
   61 FVLLIMGRYS PRLLTSYSTF YILGLLFSMQ IPFVGFQPIR TSEHMAALGV FVLLMAVATL 120
  121 RHLQSVL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [292-481]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SRNEFRKLFI VGGLLVGVGV FVAVVVLTML GVVAPWSGRF YSLWDTGYAK IHIPIIASVS  60
   61 EHQPTTWFSF FFDLHILVCA FPVGVWYCIK QINDERVFVV LYAISAVYFA GVMVRLMLTL 120
  121 TPVVCMLAGV AFSGLLDVFL QEDSSKRMGT AISAATEVDE AEDSIEKKTL YDKAGKLKHR 180
  181 TKHDAQQDTG 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [482-580]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VSSNLKSIVI LAVLMLLMMF AVHCTWVTSN AYSSPSIVLA FHNSQDGSRN ILDDFREAYY  60
   61 WLSQNTADDA RVMSWWDYGY QIAGMANRTT LVDNNTWNN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [581-774]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SHIALVGKAM SSTEEKSYEI MTSLDVDYVL VIFGGVIGYS GDDINKFLWM VRIAEGEHPK  60
   61 DIKESDYFTD RGEFRVDAEG APALLNCLMY KLSYYRFGEL KLDYRGPSGY DRTRNAVIGN 120
  121 KDFDLTYLEE AYTTEHWLVR IYRVKKPHEF NRPSLKTKER TIPPANFISR KNSKRRKGYI 180
  181 RNRPVVVKGK RTLK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle