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View Structure Prediction Details

Protein: CycB3-PA, FBpp03...
Organism: Drosophila melanogaster
Length: 575 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CycB3-PA, FBpp03....

Description E-value Query
Range
Subject
Range
gi|4033971 - gi|4033971|emb|CAA07237.1| cyclin B3 [Drosophila melanogaster]
374.0 [0..1] [575..1]

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Predicted Domain #1
Region A:
Residues: [1-207]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPTKATTRA AITSGHHQLQ QAVNPILGAL GAATRKGLTR RAAATGNIDP NVENMQTRAK  60
   61 RKADHSPIKN DKIKRSALGN LTNNVKIMTL HPAQDEEQSG VGKKPTAQQL QALMDAKKQE 120
  121 NLSVNVFGAS KMTTRASSKV EDSVENCHKV LDKLEEALAR PKPRPKAVPA AKKTVLGEVQ 180
  181 LPAMPNPMQI PVLLPPTHNL AAPQVAA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [208-299]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VKPVRRISND FNKTEDSLYM SALEDVSSCD SMRLSGNFEA ARRRSAKLQQ KTEQQPQPLL  60
   61 LTLPETAPSQ VVPIPPVPEE VEDFDRKNWD DP

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [300-575]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FQVSHYAMDI FNYLKVREAE FPIADYMPRQ IHLTTWMRTL LVDWMVEVQE TFELNHETLY  60
   61 LAVKIVDLYL CREVINKEKL QLLGAAAFFI ACKYDERQPP LIEDFLYICD GAYNHDELVR 120
  121 MERETLRVIK YDLGIPLSYR FLRRYARCAK VPMPTLTLAR YILELSLMDY ANISFSDSQM 180
  181 ASAALFMALR MHGGPGQLDK QTWTSTLIYY TGYQLADFAE IVTALNAGLH RKPRATIKTI 240
  241 RNKYSHKIFH EVAKVPLLTN QELFQGNLDL NESNLS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 80.045757
Match: 2jgzB
Description: No description for 2jgzB was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle