| Protein: | tok-PA, tok-PB, ... |
| Organism: | Drosophila melanogaster |
| Length: | 1464 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tok-PA, tok-PB, ....
| Description | E-value | Query Range |
Subject Range |
|
|
1265.0 | [0..1] | [1462..1] |
|
Region A: Residues: [1-199] |
1 11 21 31 41 51
| | | | | |
1 MRRRRGTPLG VSWTNCVLLL ATGLLVVLIS VHAKNPRPHR GLPAPAPAPV PASVDQVATE 60
61 NAHRREPTVD GSVLQRLSGS DRAVDEDEDV DEDEDEGLKH QHLEHRQQFD AYLGTIRRLR 120
121 RPYRSKYTIE QLMRLHVTPK VSGDIDMDPC KAGGFMGDIA LPEGDSGPVV AHTPIDDEEQ 180
181 ERQEVEQLLA DSPSPVHDP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [200-275] |
1 11 21 31 41 51
| | | | | |
1 PSVSGAANSG PTKFNATFQL DLEKLKQEVY HEGLQVEEEG LTDIIRKKTK LPSSGPVNLK 60
61 AGQSQSQSQS ANEPVK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [276-470] |
1 11 21 31 41 51
| | | | | |
1 PGSESPSDYA QASSYKNEVL PPSEQRIHTD KPARLTLAEI GPKFSNKTQS LHRNVDTRKI 60
61 QSDNKDIEDD SGNNFVAERR PSQIVPTSLP EQRSTPAHVY SNAGGNGMQL DDEVDFLHSR 120
121 GVVRRRHRRG PKQRRSNQHL EHEVKLQRLR EELSRPVIEA HHHQSHHQKQ AQHRQHHQSH 180
181 HRKKHRRQQQ HHRRR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [471-729] |
1 11 21 31 41 51
| | | | | |
1 GQSTTQYVNH SPPGFNQSQQ AQQQSVPEMD LLKAETSKDE EPLRHRVARA VTAKKERIWD 60
61 YGVIPYEIDG NFSGIHKALF KLAMRHWENS TCIKFVERDP EIHPNYIVFT VRSCGCCSFV 120
121 GKRGNGPQAI SIGRNCDKFG IVVHELGHVV GFWHEHTRPD REKHVVIEHN NIMKGQDYNF 180
181 NMLSPDEVDS LGMAYDYDSI MHYARNTFSK GTYLDTILPI EMKGRKRPEI GQRLRLSQGD 240
241 IAQANLLYKC PKCGRTFQE
|
| Detection Method: | |
| Confidence: | 43.522879 |
| Match: | 1astA |
| Description: | STRUCTURE OF ASTACIN AND IMPLICATIONS FOR ACTIVATION OF ASTACINS AND ZINC-LIGATION OF COLLAGENASES |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [730-833] |
1 11 21 31 41 51
| | | | | |
1 SSGIFASPSH YTAGALSNET EHCEWRITAT YGERVELKLE NMNIFKSNNC ETDYLEIRDG 60
61 YFEKSPLIGR FCGKVDKEVI RTESSRMLLT YVNTHRIEGF RGFK
|
| Detection Method: | |
| Confidence: | 5.4 |
| Match: | 1sppB |
| Description: | Major seminal plasma glycoprotein PSP-II |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [834-1065] |
1 11 21 31 41 51
| | | | | |
1 AEFDVVCGGE LSVDDAVGRL ESPNYPLDYL PNKECVWKIT VPESYQVALK FQSFEVENHD 60
61 SCVYDYVEVR DGPGQDAPLI GVFCGYKPPP NMKSSGNSMY VKFVSDTSVQ KAGFSAVFMK 120
121 EVDECETQNH GCEHECINTL GGYECSCRIG FELHSDKKHC EDACGGVIEY PNGTITSPSF 180
181 PEMYPLLKEC IWEIVAPPKH RISLNFTHFD LEGTAHQQSD CGYDSVTVYS KL
|
| Detection Method: | |
| Confidence: | 21.30103 |
| Match: | 1nt0A |
| Description: | Mannose-binding protein associated serine protease 2, MASP2 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1066-1464] |
1 11 21 31 41 51
| | | | | |
1 GENRLKRIGT FCGSSIPPTA TSESNALRLE FHSDKSIQRS GFAAVFFTDI DECAVNNGGC 60
61 QHECRNTIGS YICMCHNGYS MHENGHDCKE GECKYEISAP FGTIFSPNYP DSYPPNADCV 120
121 WHFITTPGHR IKLIFNEFDV ESHQECTYDN VAVYDGESES SSVLGRFCGD KIPFPISSTS 180
181 NQMYMVLKTD KNKQKNGFTA SHSTACGGYL RATSQVQQFY SHARFGNQDY DDGMDCEWTI 240
241 AAPDNSYVQL IFLTFDIESS ENCTFDYVQV FSDIDDVYGQ YGPMYGQYCG NVLPQDINSM 300
301 THSLLVRFKT DGSVPMKGFS ASYVAVPNSG EYDHSDEDVE NSYSSEMVTP FPGSLKSIYI 360
361 EDTQEETDEY SDFSGNQLVF NGQYRGRYSL PKRYYSGKA
|
| Detection Method: | |
| Confidence: | 3.522879 |
| Match: | 1yo8A |
| Description: | Strucuture of the C-terminal domain of human thrombospondin-2 |
Matching Structure (courtesy of the PDB): |
|
