YRC Public Data Repository - Protein Structure Prediction

Protein:	CG13623-PA, FBpp...
Organism:	Drosophila melanogaster
Length:	139 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG13623-PA, FBpp....

Description	E-value	Query Range	Subject Range
gi\|62651064, gi\|... - gi\|62651064\|ref\|XP_576075.1\| PREDICTED: similar to HESB like domain containing 1 [Rattus norvegicus]...	169.0	[0..4]	[139..25]
gi\|114653906 - gi\|114653906\|ref\|XP_001143075.1\| PREDICTED: hypothetical protein [Pan troglodytes]	166.0	[0..2]	[139..48]
gi\|28207853 - gi\|28207853\|emb\|CAD62580.1\| unnamed protein product [Homo sapiens]	165.0	[0..2]	[139..11]
ISCA2_MOUSE - Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Mus musculus GN=Isca2 PE=1 SV=2	165.0	[0..4]	[139..25]
gi\|37197683, gi\|... - gi\|37678941\|ref\|NP_933550.1\| hypothetical protein VV0757 [Vibrio vulnificus YJ016], gi\|37197683\|dbj\|...	162.0	[0..33]	[137..1]
gi\|126208405, gi... - gi\|126208405\|ref\|YP_001053630.1\| iron-binding protein IscA [Actinobacillus pleuropneumoniae L20], gi... gi\|190150256, gi... - gi\|190150256\|ref\|YP_001968781.1\| iron-binding protein IscA [Actinobacillus pleuropneumoniae serovar ... gi\|165976348, gi... - gi\|165976348\|ref\|YP_001651941.1\| iron-binding protein [Actinobacillus pleuropneumoniae serovar 3 str... gi\|32034039 - gi\|32034039\|ref\|ZP_00134283.1\| COG0316: Uncharacterized conserved protein [Actinobacillus pleuropneu...	162.0	[0..33]	[137..1]

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Predicted Domain #1

Region A:
Residues: [1-139]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFLLRQVAR SGLQRNLILM RHATASTSAN PELSVQVSES CLKRLREICV DGSFLRVTVE  60
   61 GGGCSGFQYK FDLDKQLNED DRQFGEAEAK VVIDTVSLEY CSGATVDYHS ELIRAGFRMV 120
  121 ANPLAEQGCS CGSSFSIKL

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	37.69897
Match:	2apnA
Description:	No description for 2apnA was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits