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View Structure Prediction Details

Protein: CG5991-PA, CG599...
Organism: Drosophila melanogaster
Length: 447 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG5991-PA, CG599....

Description E-value Query
Range
Subject
Range
gi|125775101, gi... - gi|54638543|gb|EAL27945.1| GA19281 [Drosophila pseudoobscura pseudoobscura], gi|125775101|ref|XP_001...
gi|54638543|gb|E... - GA19281-PA [Drosophila pseudoobscura], GA19281 [Drosophila pseudoobscura pseudoobscura]
414.0 [0..1] [447..1]

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Predicted Domain #1
Region A:
Residues: [1-70]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSYFVPRGR FLLKAGNLRQ VVQQQHQPAQ LQLQPIKGPQ PQAQNASLPV ARHLRQFSSN  60
   61 PASKEAPLHH 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [71-186]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RRPQHKQQPN PSQELAQIRR NILSRWTGFL LRWAPMGICV FGAIEWQLQK NRCEKEGKPR  60
   61 TASELQSRIY CSLPLRIISR CWGWLAACYL PPSLRPYVYG WYSNTFDVNL SEAMYP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [187-447]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EYEHYNSLAE FFTRPLKEGV RVIDQQAPLV SPADGKVLHF GSASDSLIEQ VKGVSYSIED  60
   61 FLGPLETVEQ ANSGASYAQA LKKKSDGSTE LYQCVIYLAP GDYHRFHSPT AWKPTIRRHF 120
  121 SGELLSVSPK VAGWLPGLFC LNERVLYMGQ WKHGFFSYTA VGATNVGSVE IYMDADLKTN 180
  181 RWTGFNVGKH PPSTYEYDEL VLNKELTEAP KEFGKGDLVG QFNMGSTIVL LFEAPKNFKF 240
  241 DIIAGQKIRV GESLGHIVGS K

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.13
Match: 2gprA
Description: GLUCOSE PERMEASE IIA FROM MYCOPLASMA CAPRICOLUM
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.355932616668833 bayes_pls_golite062009
catalytic activity 0.303926649807816 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle