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View Structure Prediction Details

Protein: CG13599-PA
Organism: Drosophila melanogaster
Length: 295 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG13599-PA.

Description E-value Query
Range
Subject
Range
gi|54638523|gb|E... - GA12392-PA [Drosophila pseudoobscura], GA12392 [Drosophila pseudoobscura pseudoobscura]
gi|125775061, gi... - gi|54638523|gb|EAL27925.1| GA12392 [Drosophila pseudoobscura pseudoobscura], gi|125775061|ref|XP_001...
327.0 [0..1] [295..1]
MD2BP_MOUSE - MAD2L1-binding protein OS=Mus musculus GN=Mad2l1bp PE=1 SV=2
231.0 [0..18] [153..67]
gi|149069355, gi... - gi|57528331|ref|NP_001009699.1| MAD2L1 binding protein [Rattus norvegicus], gi|56971334|gb|AAH88268....
222.0 [0..18] [153..67]
gi|168272910 - gi|168272910|dbj|BAG10294.1| MAD2L1-binding protein [synthetic construct]
MAD2L1BP - MAD2L1 binding protein
213.0 [0..18] [153..64]
gi|114607564 - gi|114607564|ref|XP_518498.2| PREDICTED: MAD2L1 binding protein isoform 2 [Pan troglodytes]
212.0 [0..18] [153..64]

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Predicted Domain #1
Region A:
Residues: [1-167]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQNVKNVDL KLDNIEVLTS GTTAEFVNGI LDFLLYQRRQ IPFVYKTYKY YVDKWSDADE  60
   61 SGESKDQESF AHYQRNQQRS KAKATKESIS DMREIIRQAF RSSEVKSLRF LFGNNMFMPS 120
  121 EAYTLHIPHD SISRDHYCEH HALPEGRINQ ALLRLLTCEE LYRLFST

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [168-295]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ELKVTNVFLE MELLTDSDRP QGSHCDSFNL IPKHILSQLP RSCKNIHLHL LHCSENTPNE  60
   61 LRCCKEMDIY HDLGVRNLDK SGEDVSQTNE EHDVLKAANE TSGWWQAEVI VRGFRAPGNQ 120
  121 KSGDLWSS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle