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View Structure Prediction Details

Protein: Pros26.4-PA, FBp...
Organism: Drosophila melanogaster
Length: 439 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Pros26.4-PA, FBp....

Description E-value Query
Range
Subject
Range
gi|125775059|ref... - GA18789-PA [Drosophila pseudoobscura], GA18789 [Drosophila pseudoobscura pseudoobscura]
gi|54638522, gi|... - gi|54638522|gb|EAL27924.1| GA18789 [Drosophila pseudoobscura pseudoobscura], gi|125775059|ref|XP_001...
365.0 [0..1] [439..1]

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Predicted Domain #1
Region A:
Residues: [1-439]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQNQSAQGG AGEKKDDKDK KKKYEPPIPT RVGKKKRRAK GPDAAMKLPQ VTPHTRCRLK  60
   61 LLKLERIKDY LMMEDEFIRN QERLKPQDEK NEEERSKVDD LRGTPMSVGN LEEIIDDNHA 120
  121 IVSTSVGSEH YVSILSFVDK DQLEPGCSVL LNHKVHAVVG VLSDDTDPMV TVMKLEKAPQ 180
  181 ETYADIGGLD TQIQEIKESV ELPLTHPEYY EEMGIKPPKG VILYGPPGTG KTLLAKAVAN 240
  241 QTSATFLRVV GSELIQKYLG DGPKLVRELF RVAEEHAPSI VFIDEIDAVG TKRYDSNSGG 300
  301 EREIQRTMLE LLNQLDGFDS RGDVKVIMAT NRIETLDPAL IRPGRIDRKI EFPLPDEKTK 360
  361 RRIFTIHTSR MTLAEDVNLS ELIMAKDDLS GADIKAICTE AGLMALRERR MKVTNEDFKK 420
  421 SKESVLYRKK EGTPEGLYL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 78.69897
Match: 1oz4A
Description: VCP/p97
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle