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View Structure Prediction Details

Protein: CG33111-PA, CG33...
Organism: Drosophila melanogaster
Length: 515 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG33111-PA, CG33....

Description E-value Query
Range
Subject
Range
gi|68388302 - gi|68388302|ref|XP_696268.1| PREDICTED: similar to slow myosin heavy chain 1 [Danio rerio]
206.0 [0..4] [515..1902]

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Predicted Domain #1
Region A:
Residues: [1-338]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERRGRIPVA KFRTQEAKTR SRSRVREPDY NEQDPEHDMF TLLEDNIALR EENKALKLEI  60
   61 ETHKTTQEEQ QAQHEKMCAT LESLQQQQTN FETQIKELSA KFNKALNERN ALDKLHKMKV 120
  121 DQIHNLTSEL EHIREKQQDQ APPIAPRSVL GSVELKRKLF KILQSGSADS ADSIGTQELD 180
  181 SLVDANSEGV PITSGLVERL ANEFLTLKNF TNSVELQLYE ANEKMAELLE QQHAMEEENE 240
  241 ALRTENSNLT KVAKLLTENM KESVETSQKM EAALIKLKQR NDELTAKTRD LTDGQPGSRT 300
  301 STSSSVLNEQ VEFEQIQDQV QQQAREHNER IVEMQNLM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 16.69897
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [339-515]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DAAIAKTTND ELKKLQLKLE ILEEQLREAV TRADRAEEQL AHYQQSEQKS LVAPTPPPPP  60
   61 PPPPPPMPGK LFPPGGLVAA GGGSLSDHIA GHSLRKGSGD KIIENVKHQV QAEAATGLDA 120
  121 LMREFKSGGV TLRRRNRRKT GTSEALKEMF QVLEISQKQN RNSKICVDLH SSRGVDV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 6.045757
Match: 2i1jA
Description: No description for 2i1jA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle