| Protein: | mbc-PA |
| Organism: | Drosophila melanogaster |
| Length: | 1970 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mbc-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
1897.0 | [0..1] | [1886..1] |
|
Region A: Residues: [1-133] |
1 11 21 31 41 51
| | | | | |
1 MSVWSDCNAK QAEFGIAKCN FDQESKPHRL NLDVGDAVII LKETTHWYYG YRQKAKEIRG 60
61 IFPKSYIHLC EYNIVNGEYC IQRTDIVEEI TKVLLEWGSI AKDYFLTTNP SFPKIRRKMN 120
121 ELNNNRAALI SGN
|
| Detection Method: |  |
| Confidence: | 5.69897 |
| Match: | 2dl3A |
| Description: | No description for 2dl3A was found. |
|
Region A: Residues: [134-322] |
1 11 21 31 41 51
| | | | | |
1 LPLDEVRKVK LLATNQIDTG NKLLGLDMVV RDESGDILDT NAICTTELYE QHMHAVQRID 60
61 KANRLSSERG TTRTPNKYSH NILLHVNAFV CKFQEDSDLL FTLFDGETHK PISENYVVKW 120
121 SRTGIARDTD QIDNNRVLFT DLSKSDLAIA KMYLVCYAIR IGSMEFKDSA ESKRTSMSIA 180
181 NSMLNASSR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [323-440] |
1 11 21 31 41 51
| | | | | |
1 KASQLSVSSS GSSSSNGEYI IRRPFGVACK DLTPFINKSD DFRGNIDLPF IMCEKETLDG 60
61 TLRKLIANKD IGKIDSKMAV TIEVLRGDIK QIKEEFPRLM HTNVPVARKM GFPEVILP
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [441-580] |
1 11 21 31 41 51
| | | | | |
1 GDVRNDLYLT ICSGEFARIA KTSEKNVEVS VCVANEQGYL MPGVLSIGAG HQPIDEYKSV 60
61 VYYHDDKPKW QETFKIHVPI EDFKQCHLRF VLKHRSSNEQ KDRTEKPFGL AYVRLMQANG 120
121 TTITQGQHIL AVYKIDHKKY
|
| Detection Method: | |
| Confidence: | 1.04 |
| Match: | 2dmgA |
| Description: | No description for 2dmgA was found. |
|
Region A: Residues: [581-641] |
1 11 21 31 41 51
| | | | | |
1 DKTVANCYLE LPATVAELQG AKPSIGGLTL LPKDQLSIGV NLCSTKLTQS VSLLGLLNWS 60
61 A
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [642-1009] |
1 11 21 31 41 51
| | | | | |
1 HKETLEQSLN ALSTVPGEEV VKFLQDILDA LFNILVENDH PEKYDQLVFM SIIHLIETVS 60
61 DLKYQHFLSV LDVYINESFS FTLAYTKLMD VLQKNISEAI SPKEKSADGN DLEESPEVRR 120
121 LYKTTRYLHY VMKFVIRSRV LYAEMNCNTD YMDFATRLQE LLRMFIDMIG CPSNLLKSEG 180
181 ALLKNLHIIA TDLMQVFEHV RLSISIVEIL EKFPPRRLTQ SKMGCIKDFV ETKLFTLPKC 240
241 RAILLPVFCK HIKDHLESKE EIAECINIMN NILKLLFRSD VGSTHNDIRD IMIILFRTVM 300
301 KAAHALDRDT GLVGKFFAIM LGILQRMDAQ HYEYFVKDLH QSGELKHFVI EILLVFEELV 360
361 SPHQKAVF
|
| Detection Method: | |
| Confidence: | 3.30103 |
| Match: | 1wa5C |
| Description: | Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [1010-1143] |
1 11 21 31 41 51
| | | | | |
1 PRDWMDMIMH QNTVILGALK HLTVVITDYF LCPFEKQIWS NFFQCSIAFL VQSPLQLNDF 60
61 NDNKRQIVFA RYRDIRKDTA MEIRKMWFQL GQHKPKFVPQ LVEPILEMSM IPEKELRQET 120
121 IPIFFDMMQC EYYS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1144-1351] |
1 11 21 31 41 51
| | | | | |
1 SRLEHESYGD TKFNNAHHKG NFSDFKTAMI EKLDILIGAG KGDAEYKHLF ETIMLERCAA 60
61 HNTLNVDGTA FVQMVTRLMD KLLEYRFIIQ DESKENRMAC TFSLLQFYSE VDLKEMYIRY 120
121 VNKLCALHME FENYTEAAFT LKLHTELLRW TDTELSHQLR SYRHNNCRTH RQLKEALYFE 180
181 IMEYFDKGKQ WECAIDMCRV LARQYEEE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1352-1497] |
1 11 21 31 41 51
| | | | | |
1 IFDYLKLAEL LNRMALFYEK IIKELRHNSE YFRVCFYGRG FPRFLQNRVY IFRGKEYERH 60
61 SDFCARMLVQ HPQAELMQTL EAPGDDITNS DGQYIQVNKV EPIMGQAFNK FNDKIINNEI 120
121 VKYFTANNVQ KFQFSRPFRD STNGGD
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1498-1652] |
1 11 21 31 41 51
| | | | | |
1 RDDVRNLWLE RTELRISYPL PGILRWFPVV ETNTFKISPL ERAVEIMKDT NRDIRQLVIL 60
61 HKSDETLHIN PLSMKLNGIV DPAVMGGFAK YEEAFLTDDY LEQNPDDKEL VEELKELIAN 120
121 QIPLLDLAIQ LHRLRAPDSL KALQEHLERC FADMQ
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [1653-1970] |
1 11 21 31 41 51
| | | | | |
1 QHVEQRYGRK SCDLKIERDS VVMRRPNSFL PSLFDGSNNR HSETSMGSSD SGLSKSTFLP 60
61 RPQTNSIKNP FSGLSFNTRP SLGHSPSIKS NKSKDKTPSK RRTKDGKVKE REAHSLSSSQ 120
121 WYTPPLSTIT STPEKEINTS IASLASTSNS SLSGPKTPDP HVLTEELTPK RPLRSEMEKE 180
181 RRLSRPASIA TPTASIKNFP DTRSLSESSN RNSVETTDST SEEDIRPPPL PAKARDSTDF 240
241 TSLSQNMDWT PNGYAMLSTI SNTSSMSTTS TLTKTSITNT TYEYLETTNF SLVGAIDGNK 300
301 PRPPTPPPKP SRHSKHIP
|
| Detection Method: | |
| Confidence: | 1.58 |
| Match: | 1h1kI |
| Description: | THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA |
Matching Structure (courtesy of the PDB): |
|
