| Protein: | Hmgcr-PA |
| Organism: | Drosophila melanogaster |
| Length: | 920 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Hmgcr-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
657.0 | [0..1] | [913..91] |
|
Region A: Residues: [1-585] |
1 11 21 31 41 51
| | | | | |
1 MIGRLFRAHG EFCASHPWEV IVALLTITAC MLTVDKNNTL DASSGLGTAT ASAAAAGGSG 60
61 SGAGSGASGT IPPSSMGGSA TSSRHRPCHG WSQSCDGLEA EYNAADVILM TIVRCTAVLY 120
121 CYYQFCSLHR LGSKYVLGIA GLFTVFSSFI FTTAIIKFLG SDISELKDAL FFLLLVIDLS 180
181 NSGRLAQLAL SGSNQAEVTQ NIARGLELLG PAISLDTIVE VLLVGVGTLS GVQRLEVLCM 240
241 FAVLSVLVNY VVFMTFYPAC LSLIFDLSRS GVDMSVVREK AKGSLLLKSL TEEEQKANPV 300
301 LQRVKLIMTT GLMAVHIYSR VAFSGSDYDA VDKTLTPTLS LNVSNNRTES GEIADIIIKW 360
361 LTMSADHIVI SIVLIALVVK FICFDNRDPL PDQLRQSGPV AIAAKASQTT PIDEEHVEQE 420
421 KDTENSAAVR TLLFTIEDQS SANASTQTDL LPLRHRLVGP IKPPRPVQEC LDILNSTEEG 480
481 SGPAALSDEE IVSIVHAGGT HCPLHKIESV LDDPERGVRI RRQIIGSRAK MPVGRLDVLP 540
541 YEHFDYRKVL NACCENVLGY VPIPVGYAGP LLLDGETYYV PMATT
|
| Detection Method: |  |
| Confidence: | 83.0 |
| Match: | 1oy6A |
| Description: | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains; Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains; Multidrug efflux transporter AcrB transmembrane domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [586-920] |
1 11 21 31 41 51
| | | | | |
1 EGALVASTNR GCKALSVRGV RSVVEDVGMT RAPCVRFPSV ARAAEAKSWI ENDENYRVVK 60
61 TEFDSTSRFG RLKDCHIAMD GPQLYIRFVA ITGDAMGMNM VSKGAEMALR RIQLQFPDMQ 120
121 IISLSGNFCC DKKPAAINWI KGRGKRVVTE CTISAATLRS VLKTDAKTLV ECNKLKNMGG 180
181 SAMAGSIGGN NAHAANMVTA VFLATGQDPA QNVTSSNCST AMECWAENSE DLYMTCTMPS 240
241 LEVGTVGGGT GLPGQSACLE MLGVRGAHAT RPGDNAKKLA QIVCATVMAG ELSLMAALVN 300
301 SDLVKSHMRH NRSSIAVNSA NNPLNVTVSS CSTIS
|
| Detection Method: | |
| Confidence: | 147.0 |
| Match: | 1dq8A |
| Description: | NAD-binding domain of HMG-CoA reductase; Substrate-binding domain of HMG-CoA reductase |
Matching Structure (courtesy of the PDB): |
|
