| Protein: | CE40591 |
| Organism: | Caenorhabditis elegans |
| Length: | 608 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE40591.
| Description | E-value | Query Range |
Subject Range |
|
|
261.0 | [0..1] | [607..1] |
|
Region A: Residues: [1-340] |
1 11 21 31 41 51
| | | | | |
1 MANCLMQLNQ CGFPNCAQYF ASQYDLTAHI EYTHIPVIEE DVKRKTLLAA SVANGEQPVQ 60
61 PAPMNLPLSY YSRVFRTAYR PNPIKPEPLK VSFNHYKRRS QRDRQIHPNH MASRILRDMM 120
121 ARQGRHITIE EAEKRLMDVD FEECGPENNE VRFRCAIVDC NKRYKSMFAL RVHMKIVHNV 180
181 VVSEDAKSLT NYPSEDVKPN ISALQQAMQH QQIQQQHHHH QQIPTSAPEP SVSSGTPTTG 240
241 TPAPNTPLAQ GSPLPGAAPT FGNPATNTTS YKCTYCSKRY KTSSGLSNHM MSSHQKISDV 300
301 QDAPTPQVVE QLISQVRMQR QQQEQNSMEQ GQQRITAPPQ
|
| Detection Method: |  |
| Confidence: | 4.77 |
| Match: | 1tf6A |
| Description: | Transcription factor IIIA, TFIIIA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.304205134456748 | bayes_pls_golite062009 |
|
Region A: Residues: [341-531] |
1 11 21 31 41 51
| | | | | |
1 TPQSQNLANL IKSSSHVRSF SVTTTQQPIR FSQQHYQVNL DNQPSTGQVL QMQMQHQKRM 60
61 KQMQEQQAAQ QAAAAAAAQQ QQQQQQQQGM QMQQAQFSSS PINQMGQQGQ QQQQMGPLPS 120
121 LQHPQQQQQQ QQYHQMPPQP QHSPYPQQQQ MHHQMVQHSP HHYQQQQQQQ QYQQQHQQSP 180
181 QFPSYQQSPQ Q
|
| Detection Method: | |
| Confidence: | 7.39794 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [532-608] |
1 11 21 31 41 51
| | | | | |
1 QQAPPPQRSP IPLSQSLPPL NSMTQQQRAS MQQMPPPNSG PLQYSPPNQQ GFGSMMSSPP 60
61 NNSQQMTPSQ QPPPYNM
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
