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View Structure Prediction Details

Protein: CG13827-PA
Organism: Drosophila melanogaster
Length: 233 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG13827-PA.

Description E-value Query
Range
Subject
Range
gi|54638085|gb|E... - GA12553-PA [Drosophila pseudoobscura], GA12553 [Drosophila pseudoobscura pseudoobscura]
gi|54638085, gi|... - gi|54638085|gb|EAL27487.1| GA12553 [Drosophila pseudoobscura pseudoobscura], gi|125774179|ref|XP_001...
223.0 [0..1] [233..1]

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Predicted Domain #1
Region A:
Residues: [1-162]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTTTKFVNE FCDIIDSYGG RDKVMKALCY SAKLVAGYHA KRNPELAKRY ATASSRISGA  60
   61 RATLRLIDDI PMIQYALEYG LGENEPDRVM QVLGVTANIV DLLYYPIEKV CWLAEHKIVD 120
  121 VKNADNWDNV NSIFWVLSVY LNLMRTMRNF SLNQEKLNRT NN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [163-233]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 INELDVKTLT KHRLEMVSIV RISLDFVHAV STLPKGYLWG GKLSTLQVGA IGTLSAGLGI  60
   61 YQIFAKRRLN K

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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