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View Structure Prediction Details

Protein: CG4624-PA
Organism: Drosophila melanogaster
Length: 350 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG4624-PA.

Description E-value Query
Range
Subject
Range
gi|50753561 - gi|50753561|ref|XP_414041.1| PREDICTED: similar to Ac39/physophilin [Gallus gallus]
446.0 [0..2] [347..6]

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Predicted Domain #1
Region A:
Residues: [1-350]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMIFNTEYG YLEALTRGFK NGMLKHSDYL NLTQCESLED VMISIQGTDY GLIFGGEQSA  60
   61 PSVEVIERCL RDRLLQQYYY IRSHSTEPLT TFMEFIRYPF MIDNVALLVA GLNNHRSMKR 120
  121 LLRMCHPLGE FDQLGAIEVA SNSAELFDAV LIDTPIARFV PRDLPMESLR YLDVEIVRAH 180
  181 LYRAYLEKFY AYCSQLGGNT ANVMTNLLSF EADRRTITIA VNAIGSDIIP KERLKMFPTC 240
  241 GYLPKIALAS MSTLNDTDKI RDVCNVFDGY GKMFDNLERD SDGMITLEDR FLMMEAKKNV 300
  301 QTFLQQYHFG IFYSFIKLKQ LEVRNIVWIS ECIAQRQTDR INAFIPIPLD 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 45.30103
Match: 1r5zA
Description: Crystal Structure of Subunit C of V-ATPase
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle