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View Structure Prediction Details

Protein: CG17119-PA, FBpp...
Organism: Drosophila melanogaster
Length: 397 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG17119-PA, FBpp....

Description E-value Query
Range
Subject
Range
gi|125773671, gi... - gi|54637829|gb|EAL27231.1| GA17357-PA [Drosophila pseudoobscura], gi|125773671|ref|XP_001358094.1| G...
281.0 [0..7] [364..617]

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Predicted Domain #1
Region A:
Residues: [1-111]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFSTHRLTT LLLLLLATVA LGNAQSSQLT VDSHDITVLL NSNETFLVFA NGLLDSDVEV  60
   61 ALGTDSEDHL LLDPATFVYP AGSTRNQSVV ITGLKAGNVK VVADSDDANK E

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [112-234]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IVKDVFVRVT VAKSRALIYT SIIFGWVYFV AWSVSFYPQI WSNYRRKSVE GLNFDFLALN  60
   61 IVGFTLYSMF NCGLYFIEDL QNEYEVRYPL GVNPVMLNDV VFSLHAMFAT CITILQCFFY 120
  121 QRA

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 29.455932
Match: PF04193.5
Description: No description for PF04193.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [235-397]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QQRVSFIAYG ILAIFAVVVV VSAGLAGGSV IHWLDFLYYC SYVKLTITII KYVPQALMNY  60
   61 RRKSTSGWSI GNILLDFTGG TLSMLQMILN AHNYDDWVSI FGDPTKFGLG LFSVLFDVFF 120
  121 MLQHYVFYRH SRESSSSDLT TVTDVQNRTN ESPPPSEVTT EKY

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 7.39794
Match: PF04193.5
Description: No description for PF04193.5 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle