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View Structure Prediction Details

Protein: Gr94a-PA
Organism: Drosophila melanogaster
Length: 404 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Gr94a-PA.

Description E-value Query
Range
Subject
Range
gi|125774019|ref... - GA17266-PA [Drosophila pseudoobscura], Gr97a [Drosophila pseudoobscura pseudoobscura]
gi|54638004, gi|... - gi|54638004|gb|EAL27406.1| Gr97a [Drosophila pseudoobscura pseudoobscura], gi|125774019|ref|XP_00135...
195.0 [0..3] [404..25]

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Predicted Domain #1
Region A:
Residues: [1-214]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFTSDYAHR RMVKFLTIIL IGFMTVFGLL ANRYRAGRRE RFRFSKANLA FASLWAIAFS  60
   61 LVYGRQIYKE YQEGQINLKD ATTLYSYMNI TVAVINYVSQ MIISDHVAKV LSKVPFFDTL 120
  121 KEFRLDSRSL YISIVLALVK TVAFPLTIEV AFILQQRRQH PEMSLIWTLY RLFPLIISNF 180
  181 LNNCYFGAMV VVKEILYALN RRLEAQLQEV NLLQ

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [215-404]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RKDQLKLYTK YYRMQRFCAL ADELDQLAYR YRLIYVHSGK YLTPMSLSMI LSLICHLLGI  60
   61 TVGFYSLYYA IADTLIMGKP YDGLGSLINL VFLSISLAEI TLLTHLCNHL LVATRRSAVI 120
  121 LQEMNLQHAD SRYRQAVHGF TLLVTVTKYQ IKPLGLYELD MRLISNVFSA VASFLLILVQ 180
  181 ADLSQRFKMQ 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle