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View Structure Prediction Details

Protein: CSN6-PA
Organism: Drosophila melanogaster
Length: 341 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSN6-PA.

Description E-value Query
Range
Subject
Range
gi|47226158 - gi|47226158|emb|CAG08305.1| unnamed protein product [Tetraodon nigroviridis]
301.0 [0..19] [341..2]

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Predicted Domain #1
Region A:
Residues: [1-261]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQMEVDVDM SAKPSTSSSA AAGSSMAVDK TADQNPQPQG NIMAAAGTSG SVTISLHPLV  60
   61 IMNISEHWTR FRAQHGEPRQ VYGALIGKQK GRNIEIMNSF ELKTDVIGDE TVINKDYYNK 120
  121 KEQQYKQVFS DLDFIGWYTT GDNPTADDIK IQRQIAAINE CPIMLQLNPL SRSVDHLPLK 180
  181 LFESLIDLVD GEATMLFVPL TYTLATEEAE RIGVDHVARM TSNESGEKSV VAEHLVAQDS 240
  241 AIKMLNTRIK IVLQYIRDVE A

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 36.0
Match: 2o95A
Description: No description for 2o95A was found.

Predicted Domain #2
Region A:
Residues: [262-341]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKLRANQEIL REAYALCHRL PVMQVPAFQE EFYTQCNDVG LISYLGTLTK GCNDMHHFVN  60
   61 KFNMLYDRQG SARRMRGLYY 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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