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View Structure Prediction Details

Protein: CG33110-PA
Organism: Drosophila melanogaster
Length: 337 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG33110-PA.

Description E-value Query
Range
Subject
Range
gi|76672739 - gi|76672739|ref|XP_610522.2| PREDICTED: similar to elongation of very long chain fatty acids (FEN1/E...
311.0 [0..33] [336..435]

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Predicted Domain #1
Region A:
Residues: [1-135]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSMNYHNYNS SSRFEMVVEI ANIALDEFKT HHITRNYTGL VQRYYQLVEE DYGDPRAKRF  60
   61 PLMEHPMFTF GMVAVYLSWV LVIGPLFMRD RKPFQLRRTL VVYNAFQVAL SGYMFYEHLM 120
  121 AGWLNYYNLK CQPVD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [136-337]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 YSDSPSSKRM LNLCYLYYLS KLTEFADTMF FVLRKKSSQI TWLHVYHHSV TPLETWVLVK  60
   61 FLAGGNATFP NLLNNFVHVC MYFYYMMAAM GPEYAKFLWW KKYMTELQIA QFVLCIFHTL 120
  121 RALFSNQCQF SKFISALLLL NASIFFCLFM NFYMQSYRKT KAAQQLQQQQ QQQKQQQQLD 180
  181 ATPCKADSNN NTAMLAQKLK AN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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