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View Structure Prediction Details

Protein: bond-PA, bond-PB...
Organism: Drosophila melanogaster
Length: 322 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for bond-PA, bond-PB....

Description E-value Query
Range
Subject
Range
gi|76672739 - gi|76672739|ref|XP_610522.2| PREDICTED: similar to elongation of very long chain fatty acids (FEN1/E...
324.0 [0..2] [300..436]

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Predicted Domain #1
Region A:
Residues: [1-101]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNYIKIVEE RISGLSKGVD ETVDSWFLMS SPMPVVAVVL VYLAFVLKIG PEYMKNRKPM  60
   61 DLKRIMVFYN AFQVLYSIWM CRTSIQESNV MASIFSKKCE I

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [102-322]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NRTREQNLTL YSGAWFYFFS KIIDLLDTTF FVLRKKDNQV SFLHVYHHTI TVLFSWGYLK  60
   61 YAPGEQGVII GILNSGVHII MYFYYMVAAM GPQYQKYLWW KKYMTSIQLI QFVLILGYML 120
  121 TVGAKGCNMP KTLTFFFVGN TVIFLYLFGN FYRKTYKKAK SVDGGSRTTG SSLAQSALRA 180
  181 AGGMGCMPQT MNAGKHLLQN GQVGKAYIDL NNNSVKPMKL E

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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