| Protein: | oa2-PA, FBpp0304263 |
| Organism: | Drosophila melanogaster |
| Length: | 508 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for oa2-PA, FBpp0304263.
| Description | E-value | Query Range |
Subject Range |
|
|
298.0 | [0..84] | [481..1] |
|
Region A: Residues: [1-83] |
1 11 21 31 41 51
| | | | | |
1 MTLLQRLQAM SATTTRTILE GSISSFGGGT NEPLASKIPV LEESASHARY LKFIADGLID 60
61 EGLGSAVGSG SSIAVSVEDV VAG
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [84-508] |
1 11 21 31 41 51
| | | | | |
1 QAQDIQASEG STDDADGSSH LALVFVKCFI IGFIILAAIL GNMLVIVSVM RHRKLRIITN 60
61 YFVVSLAVAD MLVALCAMTF NASVMISGKW MFGSVMCDMW NSFDVYFSTA SIMHLCCISV 120
121 DRYYAIVQPL DYPLIMTQRR VFIMLLMVWL SPALLSFLPI CSGWYTTTEN YKYLKSNPHI 180
181 CEFKVNKAYA IVSSSMSFWI PGIVMLSMYY RIYQEADRQE RLVYRSKVAA LLLEKHLQIS 240
241 QIPKPRPSIQ VEQSTISTMR RERKAARTLG IIMSAFLICW LPFFLWYIVS SLCDSCITPR 300
301 LLVGILFWIG YFNSALNPII YAYFNRDFRA AFKKTLKSLF PYAFYFCRRG RGRDDDRDLE 360
361 FGGPSRRGTN GAQRTGSGSA EMANCVNSTA SSEIHMSVMR ARQYAVNVTP TTDAQMQQLH 420
421 PLYTN
|
| Detection Method: | |
| Confidence: | 45.045757 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
