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View Structure Prediction Details

Protein: AP-50-PC, AP-50-...
Organism: Drosophila melanogaster
Length: 437 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AP-50-PC, AP-50-....

Description E-value Query
Range
Subject
Range
gi|50510363 - gi|50510363|dbj|BAD32167.1| mKIAA0109 protein [Mus musculus]
446.0 [0..1] [437..4]

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Predicted Domain #1
Region A:
Residues: [1-437]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIGGLFVYNH KGEVLISRVY RDDIGRNAVD AFRVNVIHAR QQVRSPVTNI ARTSFFHIKR  60
   61 ANIWLAAVTK QNVNAAMVFE FLLKIIEVMQ SYFGKISEEN IKNNFVLIYE LLDEILDFGY 120
  121 PQNTDSGTLK TFITQQGIKS ATKEEQMQIT SQVTGQIGWR REGIKYRRNE LFLDVLEYVN 180
  181 LLMSPQGQVL SAHVAGKVVM KSYLSGMPEC KFGINDKIVM ESKGRGLSGN SEAETSRSGK 240
  241 PVVVIDDCQF HQCVKLSKFE TEHSISFIPP DGEFELMRYR TTKDISLPFR VIPLVREVGR 300
  301 TKMEVKVVLK SNFKPSLLGQ KIEVKIPTPL NTSGVQLICL KGKAKYKASE NAIVWKIKRM 360
  361 AGMKETQLSA EIELLETDTK KKWTRPPISM NFEVPFAPSG FKVRYLKVFE PKLNYSDHDV 420
  421 VKWVRYIGRS GLYETRC

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 124.0
Match: 2bp5M
Description: MU2 ADAPTIN SUBUNIT (AP50) OF AP2 ADAPTOR (SECOND DOMAIN), COMPLEXED WITH NON-CANONICAL INTERNALIZATION PEPTIDE VEDYEQGLSG
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle