YRC Public Data Repository - Protein Structure Prediction

Protein:	CG7059-PC
Organism:	Drosophila melanogaster
Length:	253 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG7059-PC.

Description	E-value	Query Range	Subject Range
gi\|47212179 - gi\|47212179\|emb\|CAF95127.1\| unnamed protein product [Tetraodon nigroviridis]	279.0	[0..1]	[252..1]
gi\|50603688, gi\|... - gi\|50603688\|gb\|AAH77484.1\| MGC82549 protein [Xenopus laevis], gi\|148233078\|ref\|NP_001086809.1\| MGC82...	279.0	[0..3]	[252..2]
gi\|68396926, gi\|... - gi\|68396926\|ref\|XP_683737.1\| PREDICTED: similar to Phosphoglycerate mutase 2 (muscle) isoform 1 [Dan...	275.0	[0..1]	[252..1]
PGAM1_CHICK - Phosphoglycerate mutase 1 OS=Gallus gallus GN=PGAM1 PE=1 SV=3	274.0	[0..3]	[252..2]

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Predicted Domain #1

Region A:
Residues: [1-253]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKTNRLVIL RHGESDFNIE NKFCGWHDAP LSEFGVQEAL TVAIPALVQS ELEFDVVYSS  60
   61 VLSRSRQTAE LILSKLNCAY VPIKEDWRLC ERHYGNLTGC RKRVVADRYG EEQVQAWRRG 120
  121 YDCVPPPIDE KNRYFYTICS NPIFDDVPRG EFPLAESLHM CVDRVKPVWK EVRREVFQGT 180
  181 RVLMCVHGTV ARALVQHIEG ISNEAIEKVN IPNCVPRVYE FDLKTGGLVG AAINLGDQEY 240
  241 IRRKTAQVAA IGD

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	70.522879
Match:	1yfkA
Description:	Crystal structure of human B type phosphoglycerate mutase
Matching Structure (courtesy of the PDB):

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits