| Protein: | SKIP-PB |
| Organism: | Drosophila melanogaster |
| Length: | 952 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SKIP-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
632.0 | [0..103] | [931..207] |
|
Region A: Residues: [1-123] |
1 11 21 31 41 51
| | | | | |
1 MAVSNIVCEW LRALGLAQYA ESFLDNGYDD LEICKQVGDP DLDAIGVENP AHRHKLLKSI 60
61 RSLREKGAAS VYFMLNDPNS LSGSMEILCE TPPNNELELV LREQLETDGV RLTAHPYSTP 120
121 PSS
|
| Detection Method: |  |
| Confidence: | 19.69897 |
| Match: | 2eaoA |
| Description: | No description for 2eaoA was found. |
|
Region A: Residues: [124-309] |
1 11 21 31 41 51
| | | | | |
1 CLSDKEEDEI YGFGYGVFAP RVARGGLTQQ QQLLQQQTLQ TQQSIQQQQQ QMQQQQQQLP 60
61 IVPGQQQQGP HQHQTLPPNV AHLNFVQQNC LSPRSAYFYE FPPTAEGRET KKRTTLARLL 120
121 KGLKTVNRRD RNNQQNGAQA RAANDRLRHF QMINGGAGGQ QHSFEETIHR LKVQEAMRKK 180
181 EKFQRE
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [310-384] |
1 11 21 31 41 51
| | | | | |
1 HEEILRDIRQ GLLQMSRGEG RMDDTYMYDE ALRTGGGMGI AGLGMPLGVG GNGGGGGAAH 60
61 YAVSALHHQG HWYDE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [385-711] |
1 11 21 31 41 51
| | | | | |
1 PPYESDPDDF LMAGLNCGPA ATIQGGRVRF SNNRESTGVI SLRSAGDISL PQRGPPRRGL 60
61 IVPQQPPNPP TIIPLTHARS HDRESGDYAG SISDLQSVTS RFSTVSIGTN NCTARYRTLS 120
121 GGIGESPSLS PSPSSDYEDI GVTRGHGCLP PSLLAAKAKK NGLPHGKANT ICQKATVHHS 180
181 GEMRSSAKEI GAFNENGRNF VATKDTSRDF SNSQDNTDRG SMSDQAFACS ASSVESLPSA 240
241 SGSSTQALVR PGSPHSSISA EDRTSMASCI CKAKALVDSL PNPYDKEALK FKKGDLIDVL 300
301 SMNASGIWKG RCHGRVGHFK FINVEVL
|
| Detection Method: | |
| Confidence: | 20.522879 |
| Match: | 2eyzA |
| Description: | No description for 2eyzA was found. |
|
Region A: Residues: [712-952] |
1 11 21 31 41 51
| | | | | |
1 PEQRMKNSSS KTLAAGSRLA NSGNGSHNGG PCSVEDLLIR IGLKEYTSVF VLNGYEDLEL 60
61 FKELEPADLD YLGILNQEHR AKLLTAVQLL HDIECSDVDI PGSSSENDEA RLNNINMKHG 120
121 ASPFGRRHFP RDSGCYEGSP LPSSQTPTQA VNSTDESNSL DDVVTKCSSE IMKRVESARR 180
181 CKDNPFKTTL PGGGRLGKKS FLGGNGLMAD DTLTRGGLSE KSSDSGVSSS SLSSGPLKSS 240
241 T
|
| Detection Method: | |
| Confidence: | 17.221849 |
| Match: | 1by1A |
| Description: | beta-pix |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| enzyme regulator activity | 0.49904976298923 | bayes_pls_golite062009 |
| nucleoside-triphosphatase regulator activity | 0.46369712748634 | bayes_pls_golite062009 |
| GTPase regulator activity | 0.46355856898498 | bayes_pls_golite062009 |
| guanyl-nucleotide exchange factor activity | 0.43111420227783 | bayes_pls_golite062009 |
| binding | 0.0359693154751609 | bayes_pls_golite062009 |
