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View Structure Prediction Details

Protein: mRpL35-PA
Organism: Drosophila melanogaster
Length: 178 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mRpL35-PA.

Description E-value Query
Range
Subject
Range
MRPL35 - mitochondrial ribosomal protein L35
272.0 [0..2] [165..20]

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Predicted Domain #1
Region A:
Residues: [1-87]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRTFVTSAL RSVCRQSPAA SSLVPLVQRT QRATLMTLSR PCLLPTPSLA SPAHHQLLQL  60
   61 PGVLAATGTP SNTRNVTKFS LVKGKRK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [88-178]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TVKAVLKRFK RLDWGAWIRT HSGRQKKLFK KSAALRRRLK QHVFTNATQS WLLDKMVTSY  60
   61 WRRPKHFIND PYKPYHSRNE YYATQSKTFK V

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 2.1
Match: 2hgj7
Description: No description for 2hgj7 was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle