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View Structure Prediction Details

Protein: CG6690-PA
Organism: Drosophila melanogaster
Length: 562 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG6690-PA.

Description E-value Query
Range
Subject
Range
QSOX2_MOUSE - Sulfhydryl oxidase 2 OS=Mus musculus GN=Qsox2 PE=1 SV=1
414.0 [0..4] [561..20]

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Predicted Domain #1
Region A:
Residues: [1-487]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVWHFWVPYL TCIILILIVQ EGHSKQRCLD EEPPLYSKED NIHVVVGASL KKILAEPAMG  60
   61 KLVQFLNSYC GNCRRFAHTF RKMAVDLQKW NRVLRIYAVD CARLENVKLC RDFRITLTPT 120
  121 IRYYPSKFQR IRHGIGTDIE TTIPSEIADQ LIESLSENDY SESKGVKPIF DPIEPGNKLN 180
  181 DIYEQFDNKV TYILLVHPVD MGIETILNML PYPDVGVRII KDAEMFAQFG LKPCKQMVAL 240
  241 LNRSGKAQLI KPAGKSSSAY VESVAGLLHQ NGHTSMPTLP PAEPEYILSE GYDAFIVDYV 300
  301 LNSTKVLFQA DLEQAIYQFL HVEIPKTAFI SGFKFKALRH IIRLFRRFNV LNRDGRRMLN 360
  361 SLVNHLFEVT EITGEEFRDV VDDLQTRLDP IFAEQQYVGC LGSTPHTRRF SCSLWTLFHY 420
  421 FTVLAAQMKV YPPSSVTIGL YGLAKFFYDC KDGSMYFVKL AKRMNIAKVR THDEEILWLW 480
  481 EAHNEVN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 41.0
Match: 2b5eA
Description: Crystal Structure of Yeast Protein Disulfide Isomerase
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [488-562]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EKLAGDASGD PRFPKVQFPE RKHCPDCYTH SGEFDRDEVL KYLKRVYNLS YLSGDAEPHS  60
   61 RRSNECKSKK KYLQK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle