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View Structure Prediction Details

Protein: Gr93d-PA
Organism: Drosophila melanogaster
Length: 381 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Gr93d-PA.

Description E-value Query
Range
Subject
Range
gi|125773785, gi... - gi|54637886|gb|EAL27288.1| Gr93c [Drosophila pseudoobscura pseudoobscura], gi|125773785|ref|XP_00135...
gi|54637886|gb|E... - GA16064-PA [Drosophila pseudoobscura], Gr93c [Drosophila pseudoobscura pseudoobscura]
403.0 [0..1] [370..8]

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Predicted Domain #1
Region A:
Residues: [1-131]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKATKYSVGI LRFMSFYARF LSLVCFRLRK QKDNNVWLEE IWSNRSRWKW ISVTLRIVPL  60
   61 CIYAFTYAEW ISNRMLITEK FLHSCSLVVS IPCYLSIIHL KICHGPEVTK LVNQYLHIFR 120
  121 LGTLDIRRRS Q

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [132-222]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FGGGRELFLL ILSVCCQIHE YVFILVIASR LCGFQHIIWW VSYTYVFIIC NSIMCFGFIW  60
   61 HLSLGVLYAE LNDNLRFESG FQTAFLRKQQ R

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [223-381]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IRVQKSMALF KEISSVVTSL QDIFNVHLFL SALLTLLQVL VVWYKMIIDL GFSDFRIWSF  60
   61 SLKNLIQTLL PVLAIQEAAN QFKQTRERAL DIFLVGKSKH WMKSVEIFVT HLNLSEFRVN 120
  121 LLGLFNVSNE LFLIIVSAMF CYLVFVTQCV IVYRRRYVI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle