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View Structure Prediction Details

Protein: tsl-PB, tsl-PA, ...
Organism: Drosophila melanogaster
Length: 353 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for tsl-PB, tsl-PA, ....

Description E-value Query
Range
Subject
Range
gi|414664, gi|739457 - gi|739457|prf||2003281A torso-like protein, gi|414664|emb|CAA53285.1| torso-like [Drosophila melanog...
653.0 [0..1] [353..1]

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Predicted Domain #1
Region A:
Residues: [1-92]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSWPGLFWL LTLALLADGG RRESQLRIGK AINIFLRYGY LGISMRVIPL NDNSEPDRWV  60
   61 FKEPTKNIYR NLSGLAESHE DTTPGIFHGD FH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [93-275]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFCENRRQL FQAYFRDFSI ERMDKPWEAF TGGWFPDNAA KKLGINTSFI QGDYSYVLVR  60
   61 VVRFRETGRL NAEIPVHQPL EPDVRSRMDQ LQIGNITSAV RFMEDVGTHY VNSYTTGNSL 120
  121 YQVFVYSRKN YSMIKERIKS KGLNGLSKLD LYNYFAPWFA AHLGQIRSAS ANATVERWAR 180
  181 RKL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [276-353]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QYEYYVVKYV TLLKLHGNST LLRSLDSLLG NDAILQLDLK SLKPIFREEP EKESWYHEVL  60
   61 DNNVKLWELN MPQSHPTR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle