| Protein: | ppan-PA |
| Organism: | Drosophila melanogaster |
| Length: | 460 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ppan-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
372.0 | [0..2] | [398..4] |
|
Region A: Residues: [1-190] |
1 11 21 31 41 51
| | | | | |
1 MGGKKKVHPK TRTAAFKASE PSEIVEAPHS FVIHRGLACP YITDLTLDFR RIMEPFTASN 60
61 LREKRMNRIK DFVSLSSFFH VSHMGIFNKA STQLSFKVVR LPRGPSLTFK VHQFTLARDV 120
121 ISLSKKQMID NDHFKHAPLV IMNNFSGDGK HLKLMATTFQ NMFPSINLAT VNIGTIRRCV 180
181 LFSYNPDTKL
|
| Detection Method: |  |
| Confidence: | 9.09691 |
| Match: | 2cxhA |
| Description: | Crystal structure of probable ribosomal biogenesis protein from Aeropyrum pernix K1 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.598918599255263 | bayes_pls_golite062009 |
| protein binding | 0.225746749972714 | bayes_pls_golite062009 |
|
Region A: Residues: [191-460] |
1 11 21 31 41 51
| | | | | |
1 VEMRHYSVQV VPVGLKRAVQ KIVKGTVPNL GKCNEVVDFV TKDGYASESE AEDDEQSHVV 60
61 LAQTLKSKGN LEDKKSSIKL HEIGPRLTMQ LIKIEEGLLT GEVLYHDHVV KTEDEKETLR 120
121 KLVEKKRKQK EQRKKEQAEN RARNLKLKKD EKWAAKRAAE GRTDSDPEDD AEYYKEEVGE 180
181 EPDEELFKME AKSSRKRPSL GGGMKYKNKR AKLDTKDKND KSERTDKYDR KDKFDRKDKK 240
241 DKFDPKNRRA KFDPKNKRAK FDHRKSRKSK
|
| Detection Method: | |
| Confidence: | 4.522879 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
