| Protein: | Synd-PB |
| Organism: | Drosophila melanogaster |
| Length: | 494 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Synd-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
250.0 | [0..1] | [492..106] |
|
Region A: Residues: [1-314] |
1 11 21 31 41 51
| | | | | |
1 MSHHSDDQLL QAGSDSFWEP GNYKRTTKRI EDGYKLCNDL QQLIQERADI EKGYAKSLRT 60
61 WSKKWGELIE KGPEYGTTEA AWKGVLTESE RISDVHMKIK DNLCNDVNSQ IKTWQKENYH 120
121 HTLMQIKERK DLEDLFKKAQ KPWAKLLAKV EKAKADYHSA CKTERSATNQ ERNANADSSL 180
181 SPDQVKKMHD RVQKTKDQVQ KCREKYEQAI AEITKYNSVY IEDMTSVFEK CQTFEKTRLQ 240
241 FFKEILFNVH SCLDLTKVQS LPQIYEEFSH TINNADQQKD LKWWSNNHGI NMAMNWPSFV 300
301 EYTEEFRDIA KGNK
|
| Detection Method: |  |
| Confidence: | 26.69897 |
| Match: | 2eflA |
| Description: | No description for 2eflA was found. |
| Term | Confidence | Notes |
| binding | 2.22529267810903 | bayes_pls_golite062009 |
| protein binding | 1.87308005875135 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.476667697682482 | bayes_pls_golite062009 |
| identical protein binding | 0.442892596927351 | bayes_pls_golite062009 |
|
Region A: Residues: [315-494] |
1 11 21 31 41 51
| | | | | |
1 SKEALPAAPI TLINQRPVAE DVHEYPQTNS LKKNTSTLSS VSSRASVKSE IATTQSSVTT 60
61 SEAKTSAAVA GAATATAAAT AASAASNRNS SVTNGNGKVD ANPFDEEEEW DESDNVLVDN 120
121 GEPGVPVKAL YDYEGAESDE LTFKQGDVFE KLEDEDEQGW CKGRMNGRVG LYPANYVETA 180
181
|
| Detection Method: | |
| Confidence: | 11.154902 |
| Match: | 1ycsB |
| Description: | 53BP2 |
Matching Structure (courtesy of the PDB): |
|
