| Protein: | Oamb-PB |
| Organism: | Drosophila melanogaster |
| Length: | 637 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Oamb-PB.
| Description | E-value | Query Range |
Subject Range |
|
|
325.0 | [0..1] | [637..1] |
|
Region A: Residues: [1-401] |
1 11 21 31 41 51
| | | | | |
1 MNETECEDLI KSVKWTEPAN LISLAVLEFI NVLVIGGNCL VIAAVFCSNK LRSVTNFFIV 60
61 NLAVADLLVG LAVLPFSATW EVFKVWIFGD LWCRIWLAVD VWMCTASILN LCAISLDRYV 120
121 AVTRPVTYPS IMSTKKAKSL IAGIWVLSFF ICFPPLVGWK DQKAVIQPTY PKGNHTLYYT 180
181 TTMSSSEDGQ LGLDSIKDQG EASLPPSPPH IGNGNAYNPY DPGFAPIDGS AEIRIAAIDS 240
241 TSTSTTATTT TTASSSSTTE TEMDLDLLNA PPQNRPQTIS GSCPWKCELT NDRGYVLYSA 300
301 LGSFYIPMFV MLFFYWRIYR AAVRTTRAIN QGFKTTKGSP RESGNNRVDE SQLILRIHRG 360
361 RPCSTPQRTP LSVHSMSSTL SVNSNGGGGG AVASGLGAST E
|
| Detection Method: |  |
| Confidence: | 34.69897 |
| Match: | 2j4yA |
| Description: | No description for 2j4yA was found. |
|
Region A: Residues: [402-637] |
1 11 21 31 41 51
| | | | | |
1 DHLQGGAPKR ATSMRVCRQR HEKVAIKVSF PSSENVLDAG QQPQASPHYA VISSANGRRA 60
61 SFKTSLFDIG ETTFNLDAAA SGPGDLETGL STTSLSAKKR AGKRSAKFQV KRFRMETKAA 120
121 KTLAIIVGGF IVCWLPFFTM YLIRAFCDHC IQPTVFSVLF WLGYCNSAIN PMIYALFSNE 180
181 FRIAFKRIVC RCVCTRSGFR ASENFQMIAA RALMAPATFH KTISGCSDDG EGVDFS
|
| Detection Method: | |
| Confidence: | 4.27 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
