| Protein: | Oamb-PC, FBpp0303557 |
| Organism: | Drosophila melanogaster |
| Length: | 645 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Oamb-PC, FBpp0303557.
| Description | E-value | Query Range |
Subject Range |
|
|
300.0 | [0..2] | [418..5] |
|
Region A: Residues: [1-335] |
1 11 21 31 41 51
| | | | | |
1 MNETECEDLI KSVKWTEPAN LISLAVLEFI NVLVIGGNCL VIAAVFCSNK LRSVTNFFIV 60
61 NLAVADLLVG LAVLPFSATW EVFKVWIFGD LWCRIWLAVD VWMCTASILN LCAISLDRYV 120
121 AVTRPVTYPS IMSTKKAKSL IAGIWVLSFF ICFPPLVGWK DQKAVIQPTY PKGNHTLYYT 180
181 TTMSSSEDGQ LGLDSIKDQG EASLPPSPPH IGNGNAYNPY DPGFAPIDGS AEIRIAAIDS 240
241 TSTSTTATTT TTASSSSTTE TEMDLDLLNA PPQNRPQTIS GSCPWKCELT NDRGYVLYSA 300
301 LGSFYIPMFV MLFFYWRIYR AAVRTTRAIN QGFKT
|
| Detection Method: |  |
| Confidence: | 34.69897 |
| Match: | 1f88A |
| Description: | Rhodopsin |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [336-645] |
1 11 21 31 41 51
| | | | | |
1 TKGSKGIGSR FEEQRLTLRI HRGRGSNQQD SMHSNGSTQS TTTTLGTPSP ERLSKYATRR 60
61 LHHHDKIKIS VSYPSSENIS ELAGHGDVGH ERRQSGNALF AVHYNGTNGR ESTESQLYRQ 120
121 QQQHGVASSC YLQVGKGLPE LARRQSNTSE AGGSGHSRPA NKKMGRRNIK AQVKRFRMET 180
181 KAAKTLAIIV GMFIFCWCPF FTMYIIRPFC QDCVDPLLFS VLFWLGYCNS AVNPMIYALF 240
241 SKDFRFAFKR IICRCFCSRQ SVSLKSSRRG SDMSAIRIRA RTPSITPSAA AHSFGDESEL 300
301 HHSEMSNDPR
|
| Detection Method: | |
| Confidence: | 7.35 |
| Match: | 1f88A |
| Description: | Rhodopsin |
| Matching Structure (courtesy of the PDB): |
|
