| Protein: | KaiRIA-PA |
| Organism: | Drosophila melanogaster |
| Length: | 902 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KaiRIA-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
560.0 | [0..1] | [902..1] |
|
Region A: Residues: [1-495] |
1 11 21 31 41 51
| | | | | |
1 MHFCWISLII LSLSRVQAQF YGGNAYEASS GQSIRLGLIT DDATDRIRQT FEHAISVVNN 60
61 ELGVPLVGET EQVAYGNSVQ AFAQLCRLMQ SGVGAVFGPA ARHTASHLLN ACDSKDIPFI 120
121 YPHLSWGSNP DGFNLHPSPE DIANALYDIV NQFEWSRFIF CYESAEYLKI LDHLMTRYGI 180
181 KGPVIKVMRY DLNLNGNYKS VLRRIRKSED SRIVVVGSTT GVAELLRQAQ QVGIMNEDYT 240
241 YIIGNLNLHT FDLEEYKYSE ANITGIRMFS PDQEEVRDLM EKLHQELGES EPVNSGSTFI 300
301 TMEMALTYDA VRVIAETTKH LPYQPQMLNC SERHDNVQPD GSTFRNYMRS LEIKEKTITG 360
361 RIYFEGNVRK GFTFDVIELQ TSGLVKVGTW EEGKDFEFQR PPQAVNFNDI DDGSLVNKTF 420
421 IVLISVATKP YASLVESIDT LIGNNQFQGY GVDLIKELAD KLGFNFTFRD GGNDYGSFNK 480
481 TTNSTSGMLK EIVEG
|
| Detection Method: |  |
| Confidence: | 40.522879 |
| Match: | 2e4uA |
| Description: | No description for 2e4uA was found. |
|
Region A: Residues: [496-647] |
1 11 21 31 41 51
| | | | | |
1 RADLAITDLT ITSEREEVID FSIPFMNLGI AILYVKPQKA PPALFSFMDP FSSEVWLYLG 60
61 IAYLGVSLCF FIIGRLSPIE WDNPYPCIEE PEELENQFTI NNSLWFTTGA LLQQGSEIAP 120
121 KALSTRTISA IWWFFTLIMV SSYTANLAAF LT
|
| Detection Method: | |
| Confidence: | 1.36 |
| Match: | 2qksA |
| Description: | No description for 2qksA was found. |
|
Region A: Residues: [648-801] |
1 11 21 31 41 51
| | | | | |
1 IENPTSPINS VKDLADNKDD VQYGAKRTGS TRNFFSTSEE PIYIKMNEYL NAHPEMLMEN 60
61 NQQGVDKVKS GTKYAFLMES TSIEFNTVRE CNLTKVGDPL DEKGYGIAMV KNWPYRDKFN 120
121 KALLELQEQG VLARLKNKWW NEVGAGVCSA KSDD
|
| Detection Method: | |
| Confidence: | 28.39794 |
| Match: | 1yaeA |
| Description: | Structure of the Kainate Receptor Subunit GluR6 Agonist Binding Domain Complexed with Domoic Acid |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [802-902] |
1 11 21 31 41 51
| | | | | |
1 DGPSELGVDN LSGIYVVLVI GSIISIIISI LCWCYFVYKK AKNYEVPFCD ALAEEFRIVI 60
61 RFSENERPLK SAQSIYSRSR NSSQSIESLK TDSEENMPVE D
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
