YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: MtnC-PA
Organism: Drosophila melanogaster
Length: 43 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MtnC-PA.

Description E-value Query
Range
Subject
Range
MtnB-PA, FBpp031... - The gene Metallothionein B is referred to in FlyBase by the symbol Dmel\MtnB (CG4312, FBgn0002869). ...
gi|190651132, gi... - gi|194899767|ref|XP_001979429.1| GG15446 [Drosophila erecta], gi|190651132|gb|EDV48387.1| GG15446 [D...
gi|194127623, gi... - gi|195353986|ref|XP_002043482.1| GM23190 [Drosophila sechellia], gi|194127623|gb|EDW49666.1| GM23190...
gi|194198651, gi... - gi|195569454|ref|XP_002102724.1| GD20063 [Drosophila simulans], gi|194198651|gb|EDX12227.1| GD20063 ...
57.0 [0..1] [43..1]

Back

Predicted Domain #1
Region A:
Residues: [1-43]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVCKGCGTNC KCQDTKCGDN CACNQDCKCV CKNGPKDQCC KSK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.300 g.3.11 EGF/Laminin
View Download 0.250 g.3.11 EGF/Laminin
View Download 0.249 b.34.1 C-terminal domain of transcriptional repressors
View Download 0.247 g.55.1 Cellulose docking domain, dockering
View Download 0.241 g.62.1 Cysteine-rich DNA binding domain, (DM domain)
View Download 0.228 g.41.3 Zinc beta-ribbon
View Download 0.225 g.41.8 Zn-binding ribosomal proteins


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle