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View Structure Prediction Details

Protein: Indy-2-PB, Indy-2-PA
Organism: Drosophila melanogaster
Length: 562 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Indy-2-PB, Indy-2-PA.

Description E-value Query
Range
Subject
Range
gi|50758492 - gi|50758492|ref|XP_425404.1| PREDICTED: similar to NaDC-2 [Gallus gallus]
333.0 [0..20] [556..34]

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Predicted Domain #1
Region A:
Residues: [1-176]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEPGEQRKF VLGRCCIFHW RGKASIIIPL ITLPILIYGF QTDMAEFKCL WLIVTMALLW  60
   61 ITETLPIYVT ALFPLVFCPL LGLVNASIVC KQYFTDTIVV FLGGLIVALG IEYSNLHTRI 120
  121 ALRVIRIVGG SPRRLFVGLM SVSTFMGLWI SNSAGTAMMC PIVKALVNEL DTNKIF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [177-342]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PVYMTQEEEP VEEGEPPHPS KITVAFYAGI AYASSIGGLG TLIGTGTNLV FRGIYTERFP  60
   61 TSTVEITFAN FMFYSIPLMV IVNVTLVIIA FLITHMGLFR PNSKTGKIIA EANTNRKLME 120
  121 DVLRQRHIDL GPMSCHEIQM AIAFAFMIVL LITRKPGFVP GWSDLI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [343-562]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NRKVVGSASG LSFIVLLIFA LPTQYTFFKY CCGKGPFTAQ AIDAILSWEY VLRNIPWGLL  60
   61 FLLGGGFALA VASRETGLNI MISKAMQVLI GLPNIVVQSI TFVLANFFSA FNANVVVANI 120
  121 VLPILCEMSL ALELHPLILT LPACLGISMV YFLPVSTPPN AIVTQYAHIK TKYFACCGIV 180
  181 PTIIGISVAL VNTNTWGLII FPESKSFPDW AKEIKNQTKI 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle