| Protein: | MED25-PA |
| Organism: | Drosophila melanogaster |
| Length: | 863 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MED25-PA.
| Description | E-value | Query Range |
Subject Range |
|
|
302.0 | [0..8] | [776..11] |
|
Region A: Residues: [1-245] |
1 11 21 31 41 51
| | | | | |
1 MEVDQIPLAD VVFVIEGSAI NGAYINELKT NYILPTLEHF TTGSIDEREY LIAERFATLY 60
61 GIVVYRTAAN LLEPVCSTYG PFLQPQKVME TIERLPLVGG GMESCAHMAE GFAAAHGCFD 120
121 DISERRQLLD QTSVQRHCIL ICNSPPYQMP TTESWKYPGK SCEQLAALFN ERKINLSIIA 180
181 PRKMPVLFKL FMKADGDQPI TSKNYAKNIR HLVLLKGYSL KERAPSPNSM AAQMAAPNAA 240
241 QATVQ
|
| Detection Method: |  |
| Confidence: | 1.02 |
| Match: | 2iueA |
| Description: | No description for 2iueA was found. |
|
Region A: Residues: [246-402] |
1 11 21 31 41 51
| | | | | |
1 QQQQQQQNQA GQQQQGQGMP MDTTPAQQQQ QQQQQQQQQQ QQGNPQQQVM NMNTMQQQQP 60
61 GPNPPAGLLN PQQQQQLLQQ QQQNQFVSNQ MQNQNFQQNV GPGQNRWMYP NQPGQARPPF 120
121 MQGAGNVGGV GQGGGMQQNP NSALISRINA PPPNQTV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [403-564] |
1 11 21 31 41 51
| | | | | |
1 TSLQQQQQQQ AQQQQQQQQQ AQQQQQQRMQ MLSQQQMLNH QQLQQQQQLA QQQQQQQQGQ 60
61 QQQQVNPNAG NNMMPASNAG NMSNPQQQQQ QVGQQSNPQQ QGNPQQQQQG NSQQEQASLR 120
121 EKIWTGVLEW SEKPKSDQQK IPHTLQCTVC TNIKDGEPEI KA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [565-786] |
1 11 21 31 41 51
| | | | | |
1 ENWPPKLLMQ LMPKHLVGNI GGQFLKDSKM VVFRPTPGEA LDSLAKMMTS GYAGCVHFSS 60
61 IPNSPACDLK VLILLYTPDR NAFLGFIPNN QAMFVERLRK VIQQKQHGNM QQQQQQQQMM 120
121 QQQGKSPMEL QQQQQQQQQQ QQMQQDNSQQ QHYNQFQLNM QMGGGGPGGG PGPGPGGMPM 180
181 QQNQMQMNMM QQQRMPLGVG VGVGVGPGGV PNPNLQQQLQ QV
|
| Detection Method: | |
| Confidence: | 5.0 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [787-863] |
1 11 21 31 41 51
| | | | | |
1 APNVAAMQQQ QAQQQQQRMV RPMMSNNNPG LRQLLQHQTT PGNQFRPQMG GQNPNQMGAG 60
61 GPMVGNRNFD DGNYEFM
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
