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View Structure Prediction Details

Protein: Surf6-PA
Organism: Drosophila melanogaster
Length: 324 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Surf6-PA.

Description E-value Query
Range
Subject
Range
gi|7549210 - gi|7549210|gb|AAF63787.1|AF142406_1 200 kDa antigen p200 [Babesia bigemina]
154.0 [0..2] [322..352]

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Predicted Domain #1
Region A:
Residues: [1-324]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQAEIVKCL REEYEIEHNK DQKPEKEDLP AITKKFYQRV LELLTIHKVP YSKQEDEETY  60
   61 EEYLLSDTEE SGNKKKKQQG KLKNQDSDDE DVEARIASIK NKLRQKKGPT TERQQKRRES 120
  121 KKLKRSKGVQ KLLLSSAKNL KNENVKHQKL KNGVVKSEQE TEDSKEQIQP VKVQPVYNQE 180
  181 AKIVYSKVDF AANPGGKAKK SHQNPKEILK KLRDTKKHLT ELREQGETDK AAEIQTDIAW 240
  241 RNAFDKVEGK KVKDDTKLLQ KAIKKRRVEK KKSKTKWTER KQKVEHDKEK RQKKRQENLE 300
  301 KRSKDKKNRK LKTASKRGRI IPGY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.0
Match: 1i84S
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle