| Protein: | Dl-PB, Dl-PA, FB... |
| Organism: | Drosophila melanogaster |
| Length: | 833 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Dl-PB, Dl-PA, FB....
| Description | E-value | Query Range |
Subject Range |
|
|
422.0 | [0..1] | [833..1] |
|
Region A: Residues: [1-234] |
1 11 21 31 41 51
| | | | | |
1 MHWIKCLLTA FICFTVIVQV HSSGSFELRL KYFSNDHGRD NEGRCCSGES DGATGKCLGS 60
61 CKTRFRVCLK HYQATIDTTS QCTYGDVITP ILGENSVNLT DAQRFQNKGF TNPIQFPFSF 120
121 SWPGTFSLIV EAWHDTNNSG NARTNKLLIQ RLLVQQVLEV SSEWKTNKSE SQYTSLEYDF 180
181 RVTCDLNYYG SGCAKFCRPR DDSFGHSTCS ETGEIICLTG WQGDYCHIPK CAKG
|
| Detection Method: |  |
| Confidence: | 2.13 |
| Match: | 2dduA |
| Description: | No description for 2dduA was found. |
|
Region A: Residues: [235-338] |
1 11 21 31 41 51
| | | | | |
1 CEHGHCDKPN QCVCQLGWKG ALCNECVLEP NCIHGTCNKP WTCICNEGWG GLYCNQDLNY 60
61 CTNHRPCKNG GTCFNTGEGL YTCKCAPGYS GDDCENEIYS CDAD
|
| Detection Method: | |
| Confidence: | 8.69897 |
| Match: | 2gy5A |
| Description: | No description for 2gy5A was found. |
|
Region A: Residues: [339-508] |
1 11 21 31 41 51
| | | | | |
1 VNPCQNGGTC IDEPHTKTGY KCHCANGWSG KMCEEKVLTC SDKPCHQGIC RNVRPGLGSK 60
61 GQGYQCECPI GYSGPNCDLQ LDNCSPNPCI NGGSCQPSGK CICPAGFSGT RCETNIDDCL 120
121 GHQCENGGTC IDMVNQYRCQ CVPGFHGTHC SSKVDLCLIR PCANGGTCLN
|
| Detection Method: | |
| Confidence: | 5.0 |
| Match: | 1jv2B |
| Description: | Hybrid domain of integrin beta; Integrin beta A domain; Integrin beta tail domain; Integrin beta EGF-like domains |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [509-561] |
1 11 21 31 41 51
| | | | | |
1 LNNDYQCTCR AGFTGKDCSV DIDECSSGPC HNGGTCMNRV NSFECVCANG FRG
|
| Detection Method: | |
| Confidence: | 16.0 |
| Match: | 1tozA |
| Description: | NMR structure of the human NOTCH-1 ligand binding region |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [562-657] |
1 11 21 31 41 51
| | | | | |
1 KQCDEESYDS VTFDAHQYGA TTQARADGLT NAQVVLIAVF SVAMPLVAVI AACVVFCMKR 60
61 KRKRAQEKDD AEARKQNEQN AVATMHHNGS GVGVAL
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [658-727] |
1 11 21 31 41 51
| | | | | |
1 ASASLGGKTG SNSGLTFDGG NPNIIKNTWD KSVNNICASA AAAAAAAAAA DECLMYGGYV 60
61 ASVADNNNAN
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [728-833] |
1 11 21 31 41 51
| | | | | |
1 SDFCVAPLQR AKSQKQLNTD PTLMHRGSPA GSSAKGASGG GPGAAEGKRI SVLGEGSYCS 60
61 QRWPSLAAAG VAGACSSQLM AAASVAGSGA GTAQQQRSVV CGTPHM
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
