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View Structure Prediction Details

Protein: CG11703-PA
Organism: Drosophila melanogaster
Length: 353 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CG11703-PA.

Description E-value Query
Range
Subject
Range
gi|27820056 - gi|27820056|gb|AAL39313.2| GH20514p [Drosophila melanogaster]
442.0 [0..1] [353..25]

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Predicted Domain #1
Region A:
Residues: [1-148]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEDVMVPAG DYKLVKQIRR NQETRRKKDL PWSKRIFDID EHKLFGRTAL GWMRITGFYL  60
   61 VLYALIVCIV AFWLGIFMLA IIDPNKPRWL KGPPGLSMVP NQNRSVLAYF THIMSEVNPI 120
  121 ADRIDDFLNK LNDNAIDFFA DFNQDTTW

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [149-278]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GYATEKPTVF IKLNKVIGYV PETYDTPDDL PKEAPASLQD TVGKLGNTPK IWITCEVTNG  60
   61 PKPEMVFYPG PYFEASENMR GVTRVVAIQM NKMPENAKTF FSCKVWARNI PIDDDYQGMG 120
  121 IIKFALSMRT 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [279-353]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDDGNPDFER PSTRKAPREI DLESEELVPE PPSPNRPESM LGGLELPPPP EDEKDALDAM  60
   61 GNDAKKEEMT EPPSL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle