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View Structure Prediction Details

Protein: nos-PA
Organism: Drosophila melanogaster
Length: 401 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for nos-PA.

Description E-value Query
Range
Subject
Range
gi|63093893 - gi|63093893|dbj|BAD98174.1| nos [Drosophila parabipectinata]
462.0 [0..1] [401..1]

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Predicted Domain #1
Region A:
Residues: [1-272]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRSNLEGSG AAAVGVANPP SLAQSGKIFQ LQDNFSAFHA RGGLNILGLQ DMYLDTSGAN  60
   61 SSATLSPPIT PVTPDPSTSA QSTHFPFLAD SAATANSLLM QRQYHYHLLL QQQQQLAMAQ 120
  121 HQLALAASAA AASASHQQTD EIARSLKIFA QVTTGAAENA AGSMQDVMQE FATNGYASDD 180
  181 LGRMSYGSAP PQVQMPPQQQ HQQQQGLHLP LGRNPAQLQT NGGNLMPIPL ATHWLNNYRE 240
  241 HLNNVWRNMS YIPAAPNTMG LQAQTAATVS TN

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [273-401]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LGVGMGLGLP VQGEQLRGAS NSSNNNNNNN KVYKRYNSKA KEISRHCVFC ENNNEPEAVI  60
   61 NSHSVRDNFN RVLCPKLRTY VCPICGASGD SAHTIKYCPK KPIITMEDAI KAESFRLAKS 120
  121 SYYKQQMKV

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 36.468521
Match: PF05741.4
Description: No description for PF05741.4 was found.

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle