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View Structure Prediction Details

Protein: FBpp0307026, CG1...
Organism: Drosophila melanogaster
Length: 428 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0307026, CG1....

Description E-value Query
Range
Subject
Range
gi|114675079 - gi|114675079|ref|XP_512338.2| PREDICTED: translocase of inner mitochondrial membrane 44 [Pan troglod...
391.0 [0..14] [428..282]

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Predicted Domain #1
Region A:
Residues: [1-175]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYRIAALVRD RACLFTCQQA SQNLQQQQPR FYSAPGRRAG FFSQFFDNMK AEMDKNKEIK  60
   61 DNIRKFREEA QKLEESDALK SARQKFNIVE SEAQKSSSML KEQLGAIKER VGDVLEDASK 120
  121 SHLAKKVTEE LSKKARGVSD TISDTSGKLG QTSAFQAISN TTTTIKKEMD SASIE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 4.0
Match: 2dfsA
Description: No description for 2dfsA was found.

Predicted Domain #2
Region A:
Residues: [176-243]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NRVYRAPAKL RKRVQLVMSD SDRVVEPNTE ATGMELHKDS KFYESWENFK NNNTYVNKVL  60
   61 DWKVKYDE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [244-428]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SENPVIRASR LLTDKVSDVM GGLFSKTELS ETMTELVKID PSFDQKDFLR DCETDIIPNI  60
   61 LESIVRGDLE ILKDWCFEST FNIIANPIKE AKKAGVYLDS KILDIENIEL AMGKVMEQGP 120
  121 VLIITFQAQQ IMCVRDQKSQ VVEGDPEKVM RVHYVWVLCR DRNELNPKAA WRLMELSANS 180
  181 SEQFV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.39794
Match: 2cw9A
Description: Crystal structure of human Tim44 C-terminal domain
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle